CANDIDATE ID: 389

CANDIDATE ID: 389

NUMBER OF GENES: 4
AVERAGE SCORE:    9.9943033e-1 (range=[0.0,1.0])
AVERAGE MINIMUM BLAST P-VAL:    1.0000000e+0

Gene List
List of organisms containing most genes from the group
    Phylogenetic tree highlighting these organisms (opens new page)
List of organisms containing very few or no genes from the group
List of organisms enriched for group
List of organisms depleted for group
Phylogenetic profile similarity with known pathways
Pairwise genome context scores
Pairwise Blast scores
Pathway or protein complex matches in target organism
Genome context matrix
    Genes and their orthologs in genome browser BioCyc pages



GENE LIST:

- EG11362 (yadB) (b0144)
   Products of gene:
     - EG11362-MONOMER (glutamyl-Q tRNA(Asp) synthetase)
       Reactions:
        a tRNA containing queuosine + ATP + L-glutamate  ->  a tRNA containing glutamylated queuosine + AMP + diphosphate

- EG10949 (sfsA) (b0146)
   Products of gene:
     - EG10949-MONOMER (predicted DNA-binding transcriptional regulator of maltose metabolism)

- EG10690 (pcnB) (b0143)
   Products of gene:
     - EG10690-MONOMER (poly(A) polymerase I)
       Reactions:
        ATP + an mRNA  =  diphosphate + an mRNA

- EG10230 (dksA) (b0145)
   Products of gene:
     - EG10230-MONOMER (RNA polymerase-binding transcription factor)



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ORGANISMS CONTAINING AT LEAST 3 GENES FROM THE GROUP:

Total number of orgs: 234
Effective number of orgs (counting one per cluster within 468 clusters): 158

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
YPSE349747 ncbi Yersinia pseudotuberculosis IP 317584
YPSE273123 ncbi Yersinia pseudotuberculosis IP 329534
YPES386656 ncbi Yersinia pestis Pestoides F4
YPES377628 ncbi Yersinia pestis Nepal5164
YPES360102 ncbi Yersinia pestis Antiqua4
YPES349746 ncbi Yersinia pestis Angola4
YPES214092 ncbi Yersinia pestis CO924
YPES187410 ncbi Yersinia pestis KIM 104
YENT393305 ncbi Yersinia enterocolitica enterocolitica 80814
XORY360094 ncbi Xanthomonas oryzae pv. oryzae PXO99A3
XORY342109 ncbi Xanthomonas oryzae pv. oryzae MAFF 3110183
XORY291331 ncbi Xanthomonas oryzae pv. oryzae KACC103313
XFAS405440 ncbi Xylella fastidiosa M123
XFAS183190 ncbi Xylella fastidiosa Temecula13
XFAS160492 ncbi Xylella fastidiosa 9a5c3
XCAM487884 Xanthomonas campestris pv. paulliniae3
XCAM316273 ncbi Xanthomonas campestris pv. vesicatoria str. 85-103
XCAM314565 ncbi Xanthomonas campestris pv. campestris str. 80043
XCAM190485 ncbi Xanthomonas campestris pv. campestris str. ATCC 339133
XAXO190486 ncbi Xanthomonas axonopodis pv. citri str. 3063
XAUT78245 ncbi Xanthobacter autotrophicus Py24
VVUL216895 ncbi Vibrio vulnificus CMCP64
VVUL196600 ncbi Vibrio vulnificus YJ0164
VPAR223926 ncbi Vibrio parahaemolyticus RIMD 22106334
VFIS312309 ncbi Vibrio fischeri ES1143
VEIS391735 ncbi Verminephrobacter eiseniae EF01-23
VCHO345073 ncbi Vibrio cholerae O3954
VCHO ncbi Vibrio cholerae O1 biovar El Tor str. N169614
TTUR377629 ncbi Teredinibacter turnerae T79014
TDEN292415 ncbi Thiobacillus denitrificans ATCC 252593
STYP99287 ncbi Salmonella enterica enterica serovar Typhimurium str. LT24
STHE292459 ncbi Symbiobacterium thermophilum IAM 148633
SSP94122 ncbi Shewanella sp. ANA-34
SSP644076 Silicibacter sp. TrichCH4B3
SSP292414 ncbi Ruegeria sp. TM10403
SSON300269 ncbi Shigella sonnei Ss0464
SSED425104 ncbi Shewanella sediminis HAW-EB34
SPRO399741 ncbi Serratia proteamaculans 5684
SPEA398579 ncbi Shewanella pealeana ATCC 7003454
SONE211586 ncbi Shewanella oneidensis MR-14
SLOI323850 ncbi Shewanella loihica PV-44
SLAC55218 Ruegeria lacuscaerulensis3
SHIGELLA ncbi Shigella flexneri 2a str. 2457T4
SHAL458817 ncbi Shewanella halifaxensis HAW-EB44
SGLO343509 ncbi Sodalis glossinidius morsitans4
SFUM335543 ncbi Syntrophobacter fumaroxidans MPOB4
SFLE373384 ncbi Shigella flexneri 5 str. 84014
SFLE198214 ncbi Shigella flexneri 2a str. 3014
SENT454169 ncbi Salmonella enterica enterica serovar Heidelberg str. SL4764
SENT321314 ncbi Salmonella enterica enterica serovar Choleraesuis str. SC-B674
SENT295319 ncbi Salmonella enterica enterica serovar Paratyphi A str. ATCC 91504
SENT220341 ncbi Salmonella enterica enterica serovar Typhi str. CT184
SENT209261 ncbi Salmonella enterica enterica serovar Typhi str. Ty24
SELO269084 ncbi Synechococcus elongatus PCC 63013
SDYS300267 ncbi Shigella dysenteriae Sd1974
SDEN318161 ncbi Shewanella denitrificans OS2174
SDEG203122 ncbi Saccharophagus degradans 2-404
SBOY300268 ncbi Shigella boydii Sb2274
SBAL402882 ncbi Shewanella baltica OS1854
SBAL399599 ncbi Shewanella baltica OS1954
SACI56780 ncbi Syntrophus aciditrophicus SB4
RSOL267608 ncbi Ralstonia solanacearum GMI10003
RRUB269796 ncbi Rhodospirillum rubrum ATCC 111703
RPOM246200 ncbi Ruegeria pomeroyi DSS-33
RMET266264 ncbi Ralstonia metallidurans CH343
RFER338969 ncbi Rhodoferax ferrireducens T1183
REUT381666 ncbi Ralstonia eutropha H163
REUT264198 ncbi Ralstonia eutropha JMP1343
RDEN375451 ncbi Roseobacter denitrificans OCh 1143
RBEL391896 ncbi Rickettsia bellii OSU 85-3893
RBEL336407 ncbi Rickettsia bellii RML369-C3
PSYR223283 ncbi Pseudomonas syringae pv. tomato str. DC30004
PSYR205918 ncbi Pseudomonas syringae pv. syringae B728a4
PSTU379731 ncbi Pseudomonas stutzeri A15014
PSP56811 Psychrobacter sp.3
PSP312153 ncbi Polynucleobacter necessarius asymbioticus QLW-P1DMWA-13
PSP296591 ncbi Polaromonas sp. JS6663
PPUT76869 ncbi Pseudomonas putida GB-14
PPUT351746 ncbi Pseudomonas putida F14
PPUT160488 ncbi Pseudomonas putida KT24404
PPRO298386 ncbi Photobacterium profundum SS94
PNAP365044 ncbi Polaromonas naphthalenivorans CJ23
PMUL272843 ncbi Pasteurella multocida multocida Pm704
PMEN399739 ncbi Pseudomonas mendocina ymp4
PLUM243265 ncbi Photorhabdus luminescens laumondii TTO14
PING357804 ncbi Psychromonas ingrahamii 374
PHAL326442 ncbi Pseudoalteromonas haloplanktis TAC1254
PFLU220664 ncbi Pseudomonas fluorescens Pf-54
PFLU216595 ncbi Pseudomonas fluorescens SBW254
PFLU205922 ncbi Pseudomonas fluorescens Pf0-14
PENT384676 ncbi Pseudomonas entomophila L484
PCRY335284 ncbi Psychrobacter cryohalolentis K53
PCAR338963 ncbi Pelobacter carbinolicus DSM 23804
PATL342610 ncbi Pseudoalteromonas atlantica T6c4
PARC259536 ncbi Psychrobacter arcticus 273-43
PAER208964 ncbi Pseudomonas aeruginosa PAO14
PAER208963 ncbi Pseudomonas aeruginosa UCBPP-PA144
OANT439375 ncbi Ochrobactrum anthropi ATCC 491883
NOCE323261 ncbi Nitrosococcus oceani ATCC 197074
NMUL323848 ncbi Nitrosospira multiformis ATCC 251963
NMEN374833 ncbi Neisseria meningitidis 0534423
NMEN272831 ncbi Neisseria meningitidis FAM183
NMEN122587 ncbi Neisseria meningitidis Z24913
NMEN122586 ncbi Neisseria meningitidis MC583
NGON242231 ncbi Neisseria gonorrhoeae FA 10903
NEUR228410 ncbi Nitrosomonas europaea ATCC 197183
MXAN246197 ncbi Myxococcus xanthus DK 16223
MSUC221988 ncbi Mannheimia succiniciproducens MBEL55E4
MSP409 Methylobacterium sp.3
MSP400668 ncbi Marinomonas sp. MWYL14
MSP266779 ncbi Chelativorans sp. BNC14
MPET420662 ncbi Methylibium petroleiphilum PM13
MMAG342108 ncbi Magnetospirillum magneticum AMB-13
MFLA265072 ncbi Methylobacillus flagellatus KT3
MEXT419610 ncbi Methylobacterium extorquens PA13
MCAP243233 ncbi Methylococcus capsulatus Bath3
MAQU351348 ncbi Marinobacter aquaeolei VT84
LPNE400673 ncbi Legionella pneumophila Corby3
LPNE297246 ncbi Legionella pneumophila Paris3
LPNE297245 ncbi Legionella pneumophila Lens3
LPNE272624 ncbi Legionella pneumophila pneumophila Philadelphia 13
LINT363253 ncbi Lawsonia intracellularis PHE/MN1-003
LCHO395495 ncbi Leptothrix cholodnii SP-63
KPNE272620 ncbi Klebsiella pneumoniae pneumoniae MGH 785784
JSP375286 ncbi Janthinobacterium sp. Marseille3
JSP290400 ncbi Jannaschia sp. CCS13
ILOI283942 ncbi Idiomarina loihiensis L2TR4
HSOM228400 ncbi Haemophilus somnus 23364
HSOM205914 ncbi Haemophilus somnus 129PT4
HINF71421 ncbi Haemophilus influenzae Rd KW204
HINF374930 ncbi Haemophilus influenzae PittEE4
HINF281310 ncbi Haemophilus influenzae 86-028NP4
HHEP235279 ncbi Helicobacter hepaticus ATCC 514493
HHAL349124 ncbi Halorhodospira halophila SL14
HDUC233412 ncbi Haemophilus ducreyi 35000HP3
HCHE349521 ncbi Hahella chejuensis KCTC 23964
HARS204773 ncbi Herminiimonas arsenicoxydans3
GURA351605 ncbi Geobacter uraniireducens Rf44
GSUL243231 ncbi Geobacter sulfurreducens PCA4
GMET269799 ncbi Geobacter metallireducens GS-154
ESP42895 Enterobacter sp.4
EFER585054 ncbi Escherichia fergusonii ATCC 354694
ECOO157 ncbi Escherichia coli O157:H7 EDL9334
ECOL83334 Escherichia coli O157:H74
ECOL585397 ncbi Escherichia coli ED1a4
ECOL585057 ncbi Escherichia coli IAI394
ECOL585056 ncbi Escherichia coli UMN0264
ECOL585055 ncbi Escherichia coli 559894
ECOL585035 ncbi Escherichia coli S884
ECOL585034 ncbi Escherichia coli IAI14
ECOL481805 ncbi Escherichia coli ATCC 87394
ECOL469008 ncbi Escherichia coli BL21(DE3)4
ECOL439855 ncbi Escherichia coli SMS-3-54
ECOL413997 ncbi Escherichia coli B str. REL6064
ECOL409438 ncbi Escherichia coli SE114
ECOL405955 ncbi Escherichia coli APEC O14
ECOL364106 ncbi Escherichia coli UTI894
ECOL362663 ncbi Escherichia coli 5364
ECOL331111 ncbi Escherichia coli E24377A4
ECOL316407 ncbi Escherichia coli K-12 substr. W31104
ECOL199310 ncbi Escherichia coli CFT0734
ECAR218491 ncbi Pectobacterium atrosepticum SCRI10434
DVUL882 ncbi Desulfovibrio vulgaris Hildenborough3
DSHI398580 ncbi Dinoroseobacter shibae DFL 124
DPSY177439 ncbi Desulfotalea psychrophila LSv543
DOLE96561 ncbi Desulfococcus oleovorans Hxd33
DNOD246195 ncbi Dichelobacter nodosus VCS1703A3
DDES207559 ncbi Desulfovibrio desulfuricans desulfuricans G203
DARO159087 ncbi Dechloromonas aromatica RCB3
CVIO243365 ncbi Chromobacterium violaceum ATCC 124723
CVES412965 ncbi Candidatus Vesicomyosocius okutanii HA3
CTET212717 ncbi Clostridium tetani E883
CSP78 Caulobacter sp.3
CSP501479 Citreicella sp. SE453
CSAL290398 ncbi Chromohalobacter salexigens DSM 30434
CRUT413404 ncbi Candidatus Ruthia magnifica Cm (Calyptogena magnifica)3
CPSY167879 ncbi Colwellia psychrerythraea 34H4
CJAP155077 Cellvibrio japonicus4
CBUR434922 ncbi Coxiella burnetii Dugway 5J108-1113
CBUR360115 ncbi Coxiella burnetii RSA 3313
CBUR227377 ncbi Coxiella burnetii RSA 4933
CBOT536232 ncbi Clostridium botulinum A2 str. Kyoto3
CBOT515621 ncbi Clostridium botulinum Ba4 str. 6573
CBOT498213 ncbi Clostridium botulinum B1 str. Okra3
CBOT441772 ncbi Clostridium botulinum F str. Langeland4
CBOT441771 ncbi Clostridium botulinum A str. Hall3
CBOT441770 ncbi Clostridium botulinum A str. ATCC 193973
CBOT36826 Clostridium botulinum A3
CAULO ncbi Caulobacter crescentus CB153
BVIE269482 ncbi Burkholderia vietnamiensis G43
BTRI382640 ncbi Bartonella tribocorum CIP 1054763
BTHA271848 ncbi Burkholderia thailandensis E2643
BSUI470137 ncbi Brucella suis ATCC 234453
BSUI204722 ncbi Brucella suis 13303
BSP36773 Burkholderia sp.3
BQUI283165 ncbi Bartonella quintana Toulouse3
BPSE320373 ncbi Burkholderia pseudomallei 6683
BPSE320372 ncbi Burkholderia pseudomallei 1710b3
BPSE272560 ncbi Burkholderia pseudomallei K962433
BPET94624 Bordetella petrii3
BPAR257311 ncbi Bordetella parapertussis 128223
BOVI236 Brucella ovis3
BMEL359391 ncbi Brucella melitensis biovar Abortus 23083
BMEL224914 ncbi Brucella melitensis bv. 1 str. 16M3
BMAL320389 ncbi Burkholderia mallei NCTC 102473
BMAL320388 ncbi Burkholderia mallei SAVP13
BMAL243160 ncbi Burkholderia mallei ATCC 233443
BHEN283166 ncbi Bartonella henselae Houston-13
BCIC186490 Candidatus Baumannia cicadellinicola3
BCEN331272 ncbi Burkholderia cenocepacia HI24243
BCEN331271 ncbi Burkholderia cenocepacia AU 10543
BCAN483179 ncbi Brucella canis ATCC 233653
BBRO257310 ncbi Bordetella bronchiseptica RB503
BBAC264462 ncbi Bdellovibrio bacteriovorus HD1003
BAMB398577 ncbi Burkholderia ambifaria MC40-63
BAMB339670 ncbi Burkholderia ambifaria AMMD3
BABO262698 ncbi Brucella abortus bv. 1 str. 9-9413
ASP76114 ncbi Aromatoleum aromaticum EbN13
ASP62977 ncbi Acinetobacter sp. ADP13
ASP62928 ncbi Azoarcus sp. BH723
ASP232721 ncbi Acidovorax sp. JS423
ASAL382245 ncbi Aeromonas salmonicida salmonicida A4494
APLE434271 ncbi Actinobacillus pleuropneumoniae serovar 3 str. JL034
APLE416269 ncbi Actinobacillus pleuropneumoniae L204
AORE350688 ncbi Alkaliphilus oremlandii OhILAs3
AHYD196024 Aeromonas hydrophila dhakensis4
AFER243159 ncbi Acidithiobacillus ferrooxidans ATCC 232704
AEHR187272 ncbi Alkalilimnicola ehrlichii MLHE-14
ADEH290397 ncbi Anaeromyxobacter dehalogenans 2CP-C3
ACAU438753 ncbi Azorhizobium caulinodans ORS 5713
ABOR393595 ncbi Alcanivorax borkumensis SK24
ABAU360910 ncbi Bordetella avium 197N3
AAVE397945 ncbi Acidovorax citrulli AAC00-13
AAEO224324 ncbi Aquifex aeolicus VF53


Names of the homologs of the genes in the group in each of these orgs
  EG11362   EG10949   EG10690   EG10230   
YPSE349747 YPSIP31758_3339YPSIP31758_3337YPSIP31758_3340YPSIP31758_3338
YPSE273123 YPTB0733YPTB0735YPTB0732YPTB0734
YPES386656 YPDSF_2958YPDSF_2960YPDSF_2957YPDSF_2959
YPES377628 YPN_0691YPN_0694YPN_0690YPN_0693
YPES360102 YPA_2899YPA_2896YPA_2900YPA_2898
YPES349746 YPANGOLA_A1006YPANGOLA_A1003YPANGOLA_A1008YPANGOLA_A1005
YPES214092 YPO3398YPO3396YPO3399YPO3397
YPES187410 Y0789Y0792Y0788Y0790
YENT393305 YE0724YE0726YE0723YE0725
XORY360094 XOOORF_1985XOOORF_2239XOOORF_2031
XORY342109 XOO2572XOO2247XOO2529
XORY291331 XOO2727XOO2366XOO2682
XFAS405440 XFASM12_2028XFASM12_0195XFASM12_0307
XFAS183190 PD_1848PD_0185PD_0283
XFAS160492 XF0822XF0227XF0991
XCAM487884 XCC-B100_1885XCC-B100_2497XCC-B100_1923
XCAM316273 XCAORF_2565XCAORF_2007XCAORF_2525
XCAM314565 XC_1822XC_2470XC_1861
XCAM190485 XCC2293XCC1766XCC2255
XAXO190486 XAC2400XAC1783XAC2358
XAUT78245 XAUT_4369XAUT_3100XAUT_2952XAUT_4637
VVUL216895 VV1_1647VV1_1649VV1_1645VV1_1648
VVUL196600 VV2760VV2758VV2761VV2759
VPAR223926 VP2502VP2499VP2504VP2500
VFIS312309 VF2164VF2166VF2165
VEIS391735 VEIS_4720VEIS_1769VEIS_4557
VCHO345073 VC0395_A0126VC0395_A0128VC0395_A0125VC0395_A0127
VCHO VC0595VC0597VC0594VC0596
TTUR377629 TERTU_0574TERTU_0577TERTU_0570TERTU_0575
TDEN292415 TBD_2709TBD_2050TBD_0691
STYP99287 STM0185STM0187STM0184STM0186
STHE292459 STH2668STH949STH1054
SSP94122 SHEWANA3_3405SHEWANA3_3403SHEWANA3_3406SHEWANA3_3404
SSP644076 SCH4B_2249SCH4B_2629SCH4B_4278
SSP292414 TM1040_1133TM1040_2468TM1040_0895
SSON300269 SSO_0156SSO_0158SSO_0155SSO_0157
SSED425104 SSED_3900SSED_3898SSED_3901SSED_3899
SPRO399741 SPRO_3986SPRO_3984SPRO_3987SPRO_3985
SPEA398579 SPEA_0697SPEA_0699SPEA_0696SPEA_0698
SONE211586 SO_0873SO_0875SO_0872SO_0874
SLOI323850 SHEW_3130SHEW_3128SHEW_3131SHEW_3129
SLAC55218 SL1157_2759SL1157_1286SL1157_2579
SHIGELLA YADBSFSAPCNBDKSA
SHAL458817 SHAL_0753SHAL_0755SHAL_0752SHAL_0754
SGLO343509 SG0491SG0493SG0490SG0492
SFUM335543 SFUM_1366SFUM_4077SFUM_0308SFUM_2611
SFLE373384 SFV_0129SFV_0131SFV_0128SFV_0130
SFLE198214 AAN41799.1AAN41801.1AAN41798.1AAN41800.1
SENT454169 SEHA_C0217SEHA_C0219SEHA_C0216SEHA_C0218
SENT321314 SCH_0185SCH_0187SCH_0184SCH_0186
SENT295319 SPA0191SPA0193SPA0190SPA0192
SENT220341 STY0210STY0212STY0209STY0211
SENT209261 T0193T0195T0192T0194
SELO269084 SYC0620_DSYC2054_DSYC0746_D
SDYS300267 SDY_0160SDY_0162SDY_0159SDY_0161
SDEN318161 SDEN_3171SDEN_3169SDEN_3172SDEN_3170
SDEG203122 SDE_3373SDE_3371SDE_3376SDE_3372
SBOY300268 SBO_0133SBO_0135SBO_0132SBO_0134
SBAL402882 SHEW185_0848SHEW185_0850SHEW185_0847SHEW185_0849
SBAL399599 SBAL195_0883SBAL195_0885SBAL195_0882SBAL195_0884
SACI56780 SYN_02557SYN_02078SYN_01518SYN_01337
RSOL267608 RSC2210RSC2627RSC0046
RRUB269796 RRU_A1601RRU_A0735RRU_A2847
RPOM246200 SPO_2156SPO_3760SPO_2511
RMET266264 RMET_2581RMET_2914RMET_0126
RFER338969 RFER_1905RFER_2509RFER_3438
REUT381666 H16_A2716H16_A3081H16_A0194
REUT264198 REUT_A0900REUT_A2777REUT_A0162
RDEN375451 RD1_2608RD1_0950RD1_2792
RBEL391896 A1I_05405A1I_07055A1I_06980
RBEL336407 RBE_0457RBE_0165RBE_0178
PSYR223283 PSPTO_0967PSPTO_0971PSPTO_0963PSPTO_0969
PSYR205918 PSYR_0834PSYR_0837PSYR_0830PSYR_0835
PSTU379731 PST_3290PST_3287PST_3294PST_3289
PSP56811 PSYCPRWF_0179PSYCPRWF_2133PSYCPRWF_0180
PSP312153 PNUC_0605PNUC_1765PNUC_2014
PSP296591 BPRO_2904BPRO_3561BPRO_1064
PPUT76869 PPUTGB1_4692PPUTGB1_4689PPUTGB1_4696PPUTGB1_4691
PPUT351746 PPUT_4558PPUT_4555PPUT_4562PPUT_4557
PPUT160488 PP_4694PP_4691PP_4697PP_4693
PPRO298386 PBPRA3172PBPRA3170PBPRA3173PBPRA3171
PNAP365044 PNAP_2934PNAP_2991PNAP_3428
PMUL272843 PM1115PM0754PM0864PM0863
PMEN399739 PMEN_3586PMEN_3583PMEN_3590PMEN_3585
PLUM243265 PLU0875PLU0877PLU0874PLU0876
PING357804 PING_0583PING_0711PING_0582PING_0584
PHAL326442 PSHAA0605PSHAA0607PSHAA0604PSHAA0606
PFLU220664 PFL_5271PFL_5268PFL_5275PFL_5270
PFLU216595 PFLU5234PFLU5231PFLU5239PFLU5233
PFLU205922 PFL_4805PFL_4802PFL_4809PFL_4804
PENT384676 PSEEN4727PSEEN4724PSEEN4733PSEEN4726
PCRY335284 PCRYO_2341PCRYO_0123PCRYO_2340
PCAR338963 PCAR_2698PCAR_2282PCAR_3101PCAR_2760
PATL342610 PATL_3936PATL_3938PATL_3935PATL_3937
PARC259536 PSYC_2038PSYC_0114PSYC_2037
PAER208964 PA4724PA4721PA4727PA4723
PAER208963 PA14_62510PA14_62470PA14_62560PA14_62490
OANT439375 OANT_2043OANT_1911OANT_2122
NOCE323261 NOC_0264NOC_2279NOC_0883NOC_0879
NMUL323848 NMUL_A0797NMUL_A0882NMUL_A2552
NMEN374833 NMCC_1793NMCC_0802NMCC_0056
NMEN272831 NMC1820NMC0781NMC0040
NMEN122587 NMA2138NMA1053NMA0213
NMEN122586 NMB_0349NMB_0843NMB_0056
NGON242231 NGO1611NGO0415NGO1904
NEUR228410 NE1624NE0069NE0455
MXAN246197 MXAN_1271MXAN_2545MXAN_3200
MSUC221988 MS0490MS1230MS0926MS0927
MSP409 M446_0647M446_6951M446_4193
MSP400668 MMWYL1_4012MMWYL1_4140MMWYL1_4014MMWYL1_4011
MSP266779 MESO_1645MESO_1456MESO_2176MESO_1419
MPET420662 MPE_A2900MPE_A3020MPE_A3387
MMAG342108 AMB2803AMB1604AMB3822
MFLA265072 MFLA_1109MFLA_0600MFLA_0072
MEXT419610 MEXT_4681MEXT_0375MEXT_3036
MCAP243233 MCA_0518MCA_2312MCA_0517
MAQU351348 MAQU_0673MAQU_0675MAQU_0669MAQU_0674
LPNE400673 LPC_1365LPC_0959LPC_1806
LPNE297246 LPP1886LPP1495LPP2286
LPNE297245 LPL1875LPL1488LPL2259
LPNE272624 LPG1911LPG1538LPG2338
LINT363253 LI0462LI0880LI0085
LCHO395495 LCHO_0690LCHO_0675LCHO_3835
KPNE272620 GKPORF_B4429GKPORF_B4431GKPORF_B4428GKPORF_B4430
JSP375286 MMA_0529MMA_2874MMA_3206
JSP290400 JANN_2500JANN_0284JANN_2681
ILOI283942 IL2251IL2249IL2252IL2250
HSOM228400 HSM_0754HSM_0099HSM_1502HSM_1501
HSOM205914 HS_0456HS_0231HS_1024HS_1023
HINF71421 HI_0274HI_1611HI_0063HI_0062
HINF374930 CGSHIEE_01680CGSHIEE_05710CGSHIEE_02980CGSHIEE_02985
HINF281310 NTHI0382NTHI1431NTHI0076NTHI0074
HHEP235279 HH_0926HH_1708HH_1236
HHAL349124 HHAL_1882HHAL_1253HHAL_0677HHAL_0995
HDUC233412 HD_0320HD_0604HD_0603
HCHE349521 HCH_06257HCH_06254HCH_06262HCH_06256
HARS204773 HEAR0451HEAR2637HEAR2960
GURA351605 GURA_2226GURA_1121GURA_0292GURA_0129
GSUL243231 GSU_1329GSU_2716GSU_3250GSU_0284
GMET269799 GMET_1780GMET_1127GMET_3182GMET_3278
ESP42895 ENT638_0684ENT638_0686ENT638_0683ENT638_0685
EFER585054 EFER_0167EFER_0169EFER_0166EFER_0168
ECOO157 YADBSFSAPCNBDKSA
ECOL83334 ECS0148ECS0150ECS0147ECS0149
ECOL585397 ECED1_0149ECED1_0151ECED1_0148ECED1_0150
ECOL585057 ECIAI39_0148ECIAI39_0150ECIAI39_0147ECIAI39_0149
ECOL585056 ECUMN_0141ECUMN_0143ECUMN_0140ECUMN_0142
ECOL585055 EC55989_0138EC55989_0140EC55989_0137EC55989_0139
ECOL585035 ECS88_0154ECS88_0156ECS88_0153ECS88_0155
ECOL585034 ECIAI1_0142ECIAI1_0144ECIAI1_0141ECIAI1_0143
ECOL481805 ECOLC_3515ECOLC_3513ECOLC_3516ECOLC_3514
ECOL469008 ECBD_3475ECBD_3473ECBD_3476ECBD_3474
ECOL439855 ECSMS35_0155ECSMS35_0157ECSMS35_0154ECSMS35_0156
ECOL413997 ECB_00143ECB_00145ECB_00142ECB_00144
ECOL409438 ECSE_0144ECSE_0146ECSE_0143ECSE_0145
ECOL405955 APECO1_1841APECO1_1839APECO1_1842APECO1_1840
ECOL364106 UTI89_C0158UTI89_C0160UTI89_C0157UTI89_C0159
ECOL362663 ECP_0154ECP_0156ECP_0153ECP_0155
ECOL331111 ECE24377A_0148ECE24377A_0150ECE24377A_0147ECE24377A_0149
ECOL316407 ECK0143:JW5892:B0144ECK0145:JW0142:B0146ECK0142:JW5808:B0143ECK0144:JW0141:B0145
ECOL199310 C0177C0179C0176C0178
ECAR218491 ECA3318ECA3316ECA3319ECA3317
DVUL882 DVU_2552DVU_3224DVU_2150
DSHI398580 DSHI_1805DSHI_0118DSHI_3489DSHI_1884
DPSY177439 DP0104DP0573DP1484
DOLE96561 DOLE_2533DOLE_2098DOLE_1504
DNOD246195 DNO_0734DNO_0116DNO_0353
DDES207559 DDE_2648DDE_3594DDE_2345
DARO159087 DARO_3769DARO_3182DARO_2447
CVIO243365 CV_3433CV_1632CV_0174
CVES412965 COSY_0437COSY_0443COSY_0389
CTET212717 CTC_00977CTC_00070CTC_01205
CSP78 CAUL_2786CAUL_3792CAUL_3687
CSP501479 CSE45_1870CSE45_2926CSE45_2347
CSAL290398 CSAL_3061CSAL_3059CSAL_3063CSAL_3060
CRUT413404 RMAG_0474RMAG_0480RMAG_0420
CPSY167879 CPS_4307CPS_4305CPS_4310CPS_4306
CJAP155077 CJA_0392CJA_0395CJA_0388CJA_0393
CBUR434922 COXBU7E912_1892COXBU7E912_1795COXBU7E912_2068
CBUR360115 COXBURSA331_A0298COXBURSA331_A0390COXBURSA331_A0114
CBUR227377 CBU_0205CBU_0286CBU_1969
CBOT536232 CLM_1252CLM_0042CLM_2616
CBOT515621 CLJ_B1143CLJ_B0041CLJ_B2606
CBOT498213 CLD_3466CLD_0781CLD_2258
CBOT441772 CLI_1183CLI_0052CLI_2365CLI_1558
CBOT441771 CLC_1146CLC_0056CLC_2230
CBOT441770 CLB_1134CLB_0047CLB_2247
CBOT36826 CBO1094CBO0036CBO2302
CAULO CC1905CC2675CC2580
BVIE269482 BCEP1808_2404BCEP1808_0718BCEP1808_3173
BTRI382640 BT_0931BT_1155BT_1345
BTHA271848 BTH_I0982BTH_I1314BTH_I0166
BSUI470137 BSUIS_A1195BSUIS_A1331BSUIS_A1080
BSUI204722 BR_1147BR_1281BR_1036
BSP36773 BCEP18194_A5657BCEP18194_A3845BCEP18194_A6440
BQUI283165 BQ06840BQ06220BQ07420
BPSE320373 BURPS668_1195BURPS668_3271BURPS668_0192
BPSE320372 BURPS1710B_A1424BURPS1710B_A3590BURPS1710B_A0411
BPSE272560 BPSL1115BPSL2821BPSL0205
BPET94624 BPET0037BPET0822BPET4795
BPAR257311 BPP4372BPP3628BPP0178
BOVI236 GBOORF1148GBOORF1291GBOORF1034
BMEL359391 BAB1_1169BAB1_1299BAB1_1056
BMEL224914 BMEI0837BMEI0720BMEI0949
BMAL320389 BMA10247_0324BMA10247_2199BMA10247_3431
BMAL320388 BMASAVP1_A1041BMASAVP1_A0507BMASAVP1_A2917
BMAL243160 BMA_1915BMA_2320BMA_3255
BHEN283166 BH06390BH08360BH09660
BCIC186490 BCI_0456BCI_0228BCI_0227
BCEN331272 BCEN2424_2315BCEN2424_0758BCEN2424_3090
BCEN331271 BCEN_1703BCEN_0274BCEN_2476
BCAN483179 BCAN_A1166BCAN_A1304BCAN_A1050
BBRO257310 BB4958BB4063BB0180
BBAC264462 BD0781BD3464BD3875
BAMB398577 BAMMC406_2234BAMMC406_0677BAMMC406_2999
BAMB339670 BAMB_2354BAMB_0652BAMB_3137
BABO262698 BRUAB1_1153BRUAB1_1282BRUAB1_1041
ASP76114 EBA4133EBA7112EBB202
ASP62977 ACIAD0272ACIAD3063ACIAD0273
ASP62928 AZO0745AZO3140AZO2102
ASP232721 AJS_1982AJS_2991AJS_3683
ASAL382245 ASA_0782ASA_0784ASA_0781ASA_0783
APLE434271 APJL_1286APJL_1773APJL_0177APJL_0176
APLE416269 APL_1275APL_1737APL_0176APL_0175
AORE350688 CLOS_0467CLOS_2708CLOS_2367
AHYD196024 AHA_3535AHA_3533AHA_3536AHA_3534
AFER243159 AFE_2119AFE_2120AFE_1310AFE_1619
AEHR187272 MLG_0676MLG_1441MLG_0562MLG_0276
ADEH290397 ADEH_0295ADEH_0279ADEH_2554
ACAU438753 AZC_2199AZC_4238AZC_1664
ABOR393595 ABO_0344ABO_0347ABO_0340ABO_0345
ABAU360910 BAV3378BAV0720BAV0144
AAVE397945 AAVE_3032AAVE_1973AAVE_0808
AAEO224324 AQ_057AQ_411AQ_2095


Organism features enriched in list (features available for 218 out of the 234 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00118732292
Arrangment:Pairs 0.002861554112
Disease:Botulism 0.007101555
Disease:Brucellosis 0.007101555
Disease:Bubonic_plague 0.002617066
Disease:Dysentery 0.002617066
Disease:Gastroenteritis 0.00345211013
Endospores:No 7.877e-1340211
Endospores:Yes 0.0004635953
GC_Content_Range4:0-40 5.925e-2129213
GC_Content_Range4:40-60 3.883e-11121224
GC_Content_Range4:60-100 0.002006168145
GC_Content_Range7:0-30 0.0003125747
GC_Content_Range7:30-40 1.143e-1522166
GC_Content_Range7:50-60 3.862e-1576107
GC_Content_Range7:60-70 0.000248267134
Genome_Size_Range5:0-2 6.141e-2014155
Genome_Size_Range5:2-4 0.007752462197
Genome_Size_Range5:4-6 1.860e-19118184
Genome_Size_Range9:0-1 0.0000385127
Genome_Size_Range9:1-2 1.009e-1413128
Genome_Size_Range9:2-3 0.000113128120
Genome_Size_Range9:4-5 2.264e-96296
Genome_Size_Range9:5-6 3.935e-85688
Genome_Size_Range9:6-8 0.00406242238
Gram_Stain:Gram_Neg 3.120e-33191333
Gram_Stain:Gram_Pos 4.657e-258150
Habitat:Specialized 0.0004635953
Motility:No 5.041e-1420151
Motility:Yes 7.749e-10135267
Optimal_temp.:35-37 0.00005111213
Oxygen_Req:Anaerobic 0.000210923102
Oxygen_Req:Facultative 0.000130195201
Pathogenic_in:Animal 0.00485293466
Pathogenic_in:No 0.000339166226
Pathogenic_in:Plant 0.00382511115
Shape:Coccobacillus 0.00001701111
Shape:Coccus 3.295e-61382
Shape:Rod 8.819e-15173347
Shape:Sphere 0.0076494219
Shape:Spiral 0.0005472434
Temp._range:Hyperthermophilic 0.0002348123
Temp._range:Mesophilic 0.0024126189473
Temp._range:Psychrophilic 0.000128699
Temp._range:Thermophilic 0.0000103235



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ORGANISMS CONTAINING AT MOST 1 GENES FROM THE GROUP:

Total number of orgs: 297
Effective number of orgs (counting one per cluster within 468 clusters): 229

Organism list
Homologs in each organism in the list
Features enriched in organism list


Follow (ncbi) link, when present, to find the set of organism features for each organism
Org ID  Org Name  # genes in group found in org  
WPIP955 Wolbachia pipientis1
WPIP80849 Wolbachia endosymbiont of Brugia malayi1
UURE95667 Ureaplasma urealyticum serovar 130
UURE95664 Ureaplasma urealyticum serovar 100
UPAR505682 ncbi Ureaplasma parvum serovar 3 str. ATCC 278150
UMET351160 ncbi uncultured methanogenic archaeon RC-I0
TWHI218496 ncbi Tropheryma whipplei TW08/271
TWHI203267 ncbi Tropheryma whipplei Twist1
TVOL273116 ncbi Thermoplasma volcanium GSS11
TTHE300852 ncbi Thermus thermophilus HB81
TTHE262724 ncbi Thermus thermophilus HB271
TTEN273068 ncbi Thermoanaerobacter tengcongensis MB41
TSP1755 Thermoanaerobacter sp.1
TROS309801 ncbi Thermomicrobium roseum DSM 51591
TPSE340099 ncbi Thermoanaerobacter pseudethanolicus ATCC 332231
TPET390874 ncbi Thermotoga petrophila RKU-11
TPEN368408 ncbi Thermofilum pendens Hrk 51
TPAL243276 ncbi Treponema pallidum pallidum Nichols1
TMAR243274 ncbi Thermotoga maritima MSB81
TLET416591 ncbi Thermotoga lettingae TMO0
TKOD69014 ncbi Thermococcus kodakarensis KOD11
TDEN243275 ncbi Treponema denticola ATCC 354051
TACI273075 ncbi Thermoplasma acidophilum DSM 17281
SWOL335541 ncbi Syntrophomonas wolfei wolfei Goettingen1
STOK273063 ncbi Sulfolobus tokodaii 71
STHE322159 ncbi Streptococcus thermophilus LMD-91
STHE299768 ncbi Streptococcus thermophilus CNRZ10661
STHE264199 ncbi Streptococcus thermophilus LMG 183111
SSUI391296 ncbi Streptococcus suis 98HAH331
SSUI391295 ncbi Streptococcus suis 05ZYH331
SSP321332 ncbi Synechococcus sp. JA-2-3Ba(2-13)1
SSP321327 ncbi Synechococcus sp. JA-3-3Ab1
SSP1148 ncbi Synechocystis sp. PCC 68031
SSOL273057 ncbi Sulfolobus solfataricus P21
SSAP342451 ncbi Staphylococcus saprophyticus saprophyticus ATCC 153051
SRUB309807 ncbi Salinibacter ruber DSM 138550
SPYO370554 ncbi Streptococcus pyogenes MGAS107501
SPYO370553 ncbi Streptococcus pyogenes MGAS20961
SPYO370552 ncbi Streptococcus pyogenes MGAS102701
SPYO370551 ncbi Streptococcus pyogenes MGAS94291
SPYO319701 ncbi Streptococcus pyogenes MGAS61801
SPYO293653 ncbi Streptococcus pyogenes MGAS50051
SPYO286636 ncbi Streptococcus pyogenes MGAS103941
SPYO198466 ncbi Streptococcus pyogenes MGAS3151
SPYO193567 ncbi Streptococcus pyogenes SSI-11
SPYO186103 ncbi Streptococcus pyogenes MGAS82321
SPYO160490 ncbi Streptococcus pyogenes M1 GAS1
SPNE488221 ncbi Streptococcus pneumoniae 705851
SPNE487214 ncbi Streptococcus pneumoniae Hungary19A-61
SPNE487213 ncbi Streptococcus pneumoniae Taiwan19F-141
SPNE171101 ncbi Streptococcus pneumoniae R61
SPNE170187 ncbi Streptococcus pneumoniae G541
SPNE1313 Streptococcus pneumoniae1
SMUT210007 ncbi Streptococcus mutans UA1591
SMAR399550 ncbi Staphylothermus marinus F11
SHAE279808 ncbi Staphylococcus haemolyticus JCSC14351
SGOR29390 Streptococcus gordonii Challis1
SERY405948 ncbi Saccharopolyspora erythraea NRRL 23381
SEPI176280 ncbi Staphylococcus epidermidis ATCC 122281
SEPI176279 ncbi Staphylococcus epidermidis RP62A1
SAVE227882 ncbi Streptomyces avermitilis MA-46801
SAUR93062 ncbi Staphylococcus aureus aureus COL1
SAUR93061 ncbi Staphylococcus aureus aureus NCTC 83251
SAUR426430 ncbi Staphylococcus aureus aureus Newman1
SAUR418127 ncbi Staphylococcus aureus aureus Mu31
SAUR367830 Staphylococcus aureus aureus USA3001
SAUR359787 ncbi Staphylococcus aureus aureus JH11
SAUR359786 ncbi Staphylococcus aureus aureus JH91
SAUR282459 ncbi Staphylococcus aureus aureus MSSA4761
SAUR282458 ncbi Staphylococcus aureus aureus MRSA2521
SAUR273036 ncbi Staphylococcus aureus RF1221
SAUR196620 ncbi Staphylococcus aureus aureus MW21
SAUR158879 ncbi Staphylococcus aureus aureus N3151
SAUR158878 ncbi Staphylococcus aureus aureus Mu501
SALA317655 ncbi Sphingopyxis alaskensis RB22561
SAGA211110 ncbi Streptococcus agalactiae NEM3161
SAGA208435 ncbi Streptococcus agalactiae 2603V/R1
SAGA205921 ncbi Streptococcus agalactiae A9091
SACI330779 ncbi Sulfolobus acidocaldarius DSM 6391
RXYL266117 ncbi Rubrobacter xylanophilus DSM 99410
RSP357808 ncbi Roseiflexus sp. RS-10
RLEG216596 ncbi Rhizobium leguminosarum bv. viciae 38411
RETL347834 ncbi Rhizobium etli CFN 421
RCAS383372 ncbi Roseiflexus castenholzii DSM 139410
PTOR263820 ncbi Picrophilus torridus DSM 97901
PTHE370438 ncbi Pelotomaculum thermopropionicum SI0
PSP117 Pirellula sp.1
PRUM264731 ncbi Prevotella ruminicola 230
PPEN278197 ncbi Pediococcus pentosaceus ATCC 257451
PMOB403833 ncbi Petrotoga mobilis SJ950
PMAR93060 ncbi Prochlorococcus marinus MIT 92151
PMAR74546 ncbi Prochlorococcus marinus MIT 93121
PMAR59920 ncbi Prochlorococcus marinus NATL2A1
PMAR167555 ncbi Prochlorococcus marinus NATL1A1
PMAR167546 ncbi Prochlorococcus marinus MIT 93011
PMAR167542 ncbi Prochlorococcus marinus MIT 95151
PMAR167540 Prochlorococcus marinus pastoris MED4ax1
PMAR146891 ncbi Prochlorococcus marinus AS96011
PLUT319225 ncbi Chlorobium luteolum DSM 2730
PISL384616 ncbi Pyrobaculum islandicum DSM 41841
PINT246198 Prevotella intermedia 170
PHOR70601 ncbi Pyrococcus horikoshii OT30
PGIN242619 ncbi Porphyromonas gingivalis W830
PFUR186497 ncbi Pyrococcus furiosus DSM 36381
PDIS435591 ncbi Parabacteroides distasonis ATCC 85030
PAST100379 Onion yellows phytoplasma1
PARS340102 ncbi Pyrobaculum arsenaticum DSM 135141
PAER178306 ncbi Pyrobaculum aerophilum IM21
PACN267747 ncbi Propionibacterium acnes KPA1712021
PABY272844 ncbi Pyrococcus abyssi GE50
OIHE221109 ncbi Oceanobacillus iheyensis HTE8311
NSP103690 ncbi Nostoc sp. PCC 71201
NPHA348780 ncbi Natronomonas pharaonis DSM 21600
NARO279238 ncbi Novosphingobium aromaticivorans DSM 124441
MVAN350058 ncbi Mycobacterium vanbaalenii PYR-11
MTUB419947 ncbi Mycobacterium tuberculosis H37Ra0
MTUB336982 ncbi Mycobacterium tuberculosis F110
MTHE349307 ncbi Methanosaeta thermophila PT0
MTHE187420 ncbi Methanothermobacter thermautotrophicus Delta H1
MTBRV ncbi Mycobacterium tuberculosis H37Rv0
MTBCDC ncbi Mycobacterium tuberculosis CDC15510
MSYN262723 ncbi Mycoplasma synoviae 530
MSTA339860 ncbi Methanosphaera stadtmanae DSM 30911
MSP189918 ncbi Mycobacterium sp. KMS1
MSP164757 ncbi Mycobacterium sp. JLS1
MSP164756 ncbi Mycobacterium sp. MCS1
MSED399549 ncbi Metallosphaera sedula DSM 53481
MPUL272635 ncbi Mycoplasma pulmonis UAB CTIP0
MPNE272634 ncbi Mycoplasma pneumoniae M1290
MPEN272633 ncbi Mycoplasma penetrans HF-20
MMYC272632 ncbi Mycoplasma mycoides mycoides SC str. PG10
MMOB267748 ncbi Mycoplasma mobile 163K0
MMAZ192952 ncbi Methanosarcina mazei Go10
MMAR444158 ncbi Methanococcus maripaludis C60
MMAR426368 ncbi Methanococcus maripaludis C70
MMAR402880 ncbi Methanococcus maripaludis C50
MMAR368407 ncbi Methanoculleus marisnigri JR10
MMAR267377 ncbi Methanococcus maripaludis S20
MLEP272631 ncbi Mycobacterium leprae TN1
MLAB410358 ncbi Methanocorpusculum labreanum Z0
MKAN190192 ncbi Methanopyrus kandleri AV190
MJAN243232 ncbi Methanocaldococcus jannaschii DSM 26610
MHYO295358 ncbi Mycoplasma hyopneumoniae 2320
MHYO262722 ncbi Mycoplasma hyopneumoniae 74480
MHYO262719 ncbi Mycoplasma hyopneumoniae J0
MHUN323259 ncbi Methanospirillum hungatei JF-10
MGEN243273 ncbi Mycoplasma genitalium G370
MFLO265311 ncbi Mesoplasma florum L10
MCAP340047 ncbi Mycoplasma capricolum capricolum ATCC 273430
MBUR259564 ncbi Methanococcoides burtonii DSM 62421
MBOV410289 ncbi Mycobacterium bovis BCG str. Pasteur 1173P20
MBOV233413 ncbi Mycobacterium bovis AF2122/970
MBAR269797 ncbi Methanosarcina barkeri Fusaro0
MAVI243243 ncbi Mycobacterium avium 1041
MART243272 ncbi Mycoplasma arthritidis 158L3-10
MAER449447 ncbi Microcystis aeruginosa NIES-8431
MAEO419665 ncbi Methanococcus aeolicus Nankai-30
MACE188937 ncbi Methanosarcina acetivorans C2A0
LXYL281090 ncbi Leifsonia xyli xyli CTCB071
LWEL386043 ncbi Listeria welshimeri serovar 6b str. SLCC53341
LSPH444177 ncbi Lysinibacillus sphaericus C3-411
LSAK314315 ncbi Lactobacillus sakei sakei 23K1
LREU557436 ncbi Lactobacillus reuteri DSM 200161
LPLA220668 ncbi Lactobacillus plantarum WCFS11
LMON265669 ncbi Listeria monocytogenes 4b F23651
LMON169963 ncbi Listeria monocytogenes EGD-e1
LMES203120 ncbi Leuconostoc mesenteroides mesenteroides ATCC 82931
LLAC272623 ncbi Lactococcus lactis lactis Il14031
LLAC272622 ncbi Lactococcus lactis cremoris SK111
LJOH257314 ncbi Lactobacillus johnsonii NCC 5331
LINT267671 ncbi Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1301
LINT189518 ncbi Leptospira interrogans serovar Lai str. 566011
LINN272626 ncbi Listeria innocua Clip112621
LHEL405566 ncbi Lactobacillus helveticus DPC 45711
LGAS324831 ncbi Lactobacillus gasseri ATCC 333231
LDEL390333 ncbi Lactobacillus delbrueckii bulgaricus ATCC 118421
LDEL321956 ncbi Lactobacillus delbrueckii bulgaricus ATCC BAA-3651
LBRE387344 ncbi Lactobacillus brevis ATCC 3671
LBOR355277 ncbi Leptospira borgpetersenii serovar Hardjo-bovis JB1971
LBOR355276 ncbi Leptospira borgpetersenii serovar Hardjo-bovis L5501
LBIF456481 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Paris)1
LBIF355278 ncbi Leptospira biflexa serovar Patoc strain Patoc 1 (Ames)1
LACI272621 ncbi Lactobacillus acidophilus NCFM1
KRAD266940 ncbi Kineococcus radiotolerans SRS302161
IHOS453591 ncbi Ignicoccus hospitalis KIN4/I1
HWAL362976 ncbi Haloquadratum walsbyi DSM 167901
HSP64091 ncbi Halobacterium sp. NRC-10
HSAL478009 ncbi Halobacterium salinarum R10
HNEP81032 Hyphomonas neptunium1
HMUK485914 ncbi Halomicrobium mukohataei DSM 122860
HMAR272569 ncbi Haloarcula marismortui ATCC 430490
HBUT415426 ncbi Hyperthermus butylicus DSM 54561
HAUR316274 ncbi Herpetosiphon aurantiacus ATCC 237791
GVIO251221 ncbi Gloeobacter violaceus PCC 74211
GTHE420246 ncbi Geobacillus thermodenitrificans NG80-21
GOXY290633 ncbi Gluconobacter oxydans 621H1
GKAU235909 ncbi Geobacillus kaustophilus HTA4261
GFOR411154 ncbi Gramella forsetii KT08030
GBET391165 ncbi Granulibacter bethesdensis CGDNIH11
FTUL458234 ncbi Francisella tularensis holarctica FTNF002-001
FTUL418136 ncbi Francisella tularensis tularensis WY96-34181
FTUL401614 ncbi Francisella novicida U1121
FTUL393115 ncbi Francisella tularensis tularensis FSC1981
FTUL393011 ncbi Francisella tularensis holarctica OSU181
FTUL351581 Francisella tularensis holarctica FSC2001
FSP1855 Frankia sp. EAN1pec1
FSP106370 ncbi Frankia sp. CcI31
FRANT ncbi Francisella tularensis tularensis SCHU S41
FPHI484022 ncbi Francisella philomiragia philomiragia ATCC 250171
FNUC190304 ncbi Fusobacterium nucleatum nucleatum ATCC 255861
FNOD381764 ncbi Fervidobacterium nodosum Rt17-B10
FMAG334413 ncbi Finegoldia magna ATCC 293281
FJOH376686 ncbi Flavobacterium johnsoniae UW1010
FALN326424 ncbi Frankia alni ACN14a1
ERUM302409 ncbi Ehrlichia ruminantium Gardel1
EFAE226185 ncbi Enterococcus faecalis V5831
ECHA205920 ncbi Ehrlichia chaffeensis Arkansas1
ECAN269484 ncbi Ehrlichia canis Jake1
DSP255470 ncbi Dehalococcoides sp. CBDB10
DSP216389 ncbi Dehalococcoides sp. BAV10
DRED349161 ncbi Desulfotomaculum reducens MI-11
DRAD243230 ncbi Deinococcus radiodurans R11
DGEO319795 ncbi Deinococcus geothermalis DSM 113001
DETH243164 ncbi Dehalococcoides ethenogenes 1951
CTRA471473 ncbi Chlamydia trachomatis L2b/UCH-1/proctitis1
CTRA471472 ncbi Chlamydia trachomatis 434/Bu1
CTEP194439 ncbi Chlorobium tepidum TLS0
CSUL444179 ncbi Candidatus Sulcia muelleri GWSS0
CPRO264201 ncbi Candidatus Protochlamydia amoebophila UWE251
CPNE182082 ncbi Chlamydophila pneumoniae TW-1831
CPNE138677 ncbi Chlamydophila pneumoniae J1381
CPNE115713 ncbi Chlamydophila pneumoniae CWL0291
CPNE115711 ncbi Chlamydophila pneumoniae AR391
CPEL335992 ncbi Candidatus Pelagibacter ubique HTCC10621
CNOV386415 ncbi Clostridium novyi NT1
CMUR243161 ncbi Chlamydia muridarum Nigg1
CMIC443906 ncbi Clavibacter michiganensis michiganensis NCPPB 3821
CMIC31964 ncbi Clavibacter michiganensis sepedonicus1
CMET456442 ncbi Candidatus Methanoregula boonei 6A80
CMAQ397948 ncbi Caldivirga maquilingensis IC-1671
CKOR374847 ncbi Candidatus Korarchaeum cryptofilum OPF80
CJEJ195099 ncbi Campylobacter jejuni RM12211
CJEI306537 ncbi Corynebacterium jeikeium K4111
CHYD246194 ncbi Carboxydothermus hydrogenoformans Z-29011
CHUT269798 ncbi Cytophaga hutchinsonii ATCC 334060
CGLU196627 ncbi Corynebacterium glutamicum ATCC 130321
CFET360106 ncbi Campylobacter fetus fetus 82-401
CFEL264202 ncbi Chlamydophila felis Fe/C-561
CEFF196164 ncbi Corynebacterium efficiens YS-3141
CDIP257309 ncbi Corynebacterium diphtheriae NCTC 131290
CDIF272563 ncbi Clostridium difficile 6301
CDES477974 ncbi Candidatus Desulforudis audaxviator MP104C1
CCHL340177 ncbi Chlorobium chlorochromatii CaD31
CCAV227941 ncbi Chlamydophila caviae GPIC1
CBLO291272 ncbi Candidatus Blochmannia pennsylvanicus BPEN1
CBLO203907 ncbi Candidatus Blochmannia floridanus1
CACE272562 ncbi Clostridium acetobutylicum ATCC 8241
CABO218497 ncbi Chlamydophila abortus S26/31
BXEN266265 ncbi Burkholderia xenovorans LB4000
BWEI315730 ncbi Bacillus weihenstephanensis KBAB41
BTUR314724 ncbi Borrelia turicatae 91E1351
BTHU412694 ncbi Bacillus thuringiensis Al Hakam1
BTHU281309 ncbi Bacillus thuringiensis serovar konkukian str. 97-271
BTHE226186 ncbi Bacteroides thetaiotaomicron VPI-54820
BSUB ncbi Bacillus subtilis subtilis 1681
BPUM315750 ncbi Bacillus pumilus SAFR-0321
BLIC279010 ncbi Bacillus licheniformis ATCC 145801
BHER314723 ncbi Borrelia hermsii DAH1
BGAR290434 ncbi Borrelia garinii PBi1
BFRA295405 ncbi Bacteroides fragilis YCH460
BFRA272559 ncbi Bacteroides fragilis NCTC 93430
BCLA66692 ncbi Bacillus clausii KSM-K161
BCER572264 ncbi Bacillus cereus 03BB1021
BCER405917 Bacillus cereus W1
BCER315749 ncbi Bacillus cytotoxicus NVH 391-981
BCER288681 ncbi Bacillus cereus E33L1
BCER226900 ncbi Bacillus cereus ATCC 145791
BBUR224326 ncbi Borrelia burgdorferi B311
BBAC360095 ncbi Bartonella bacilliformis KC5831
BAPH372461 ncbi Buchnera aphidicola Cc (Cinara cedri)1
BANT592021 ncbi Bacillus anthracis A02481
BANT568206 ncbi Bacillus anthracis CDC 6841
BANT261594 ncbi Bacillus anthracis Ames Ancestor1
BANT260799 ncbi Bacillus anthracis Sterne1
BAMY326423 ncbi Bacillus amyloliquefaciens FZB421
BAFZ390236 ncbi Borrelia afzelii PKo1
AYEL322098 ncbi Aster yellows witches-broom phytoplasma AYWB1
AVAR240292 ncbi Anabaena variabilis ATCC 294131
AURANTIMONAS Aurantimonas manganoxydans SI85-9A10
APER272557 ncbi Aeropyrum pernix K11
ANAE240017 Actinomyces oris MG11
AMET293826 ncbi Alkaliphilus metalliredigens QYMF1
ALAI441768 ncbi Acholeplasma laidlawii PG-8A1
AFUL224325 ncbi Archaeoglobus fulgidus DSM 43041
ACEL351607 ncbi Acidothermus cellulolyticus 11B1
ABUT367737 ncbi Arcobacter butzleri RM40180
ABAC204669 ncbi Candidatus Koribacter versatilis Ellin3451


Names of the homologs of the genes in the group in each of these orgs
  EG11362   EG10949   EG10690   EG10230   
WPIP955 WD_0444
WPIP80849 WB_0687
UURE95667
UURE95664
UPAR505682
UMET351160
TWHI218496 TW0776
TWHI203267 TW800
TVOL273116 TVN0704
TTHE300852 TTHA1707
TTHE262724 TT_C1343
TTEN273068 TTE2367
TSP1755 TETH514_0815
TROS309801 TRD_0049
TPSE340099 TETH39_0323
TPET390874 TPET_0353
TPEN368408 TPEN_1818
TPAL243276 TP_0596
TMAR243274 TM_0565
TLET416591
TKOD69014 TK0779
TDEN243275 TDE_1726
TACI273075 TA0795
SWOL335541 SWOL_1813
STOK273063 ST1054
STHE322159 STER_0461
STHE299768 STR0425
STHE264199 STU0425
SSUI391296 SSU98_0829
SSUI391295 SSU05_0829
SSP321332 CYB_0229
SSP321327 CYA_0465
SSP1148 SLL2014
SSOL273057 SSO2571
SSAP342451 SSP1287
SRUB309807
SPYO370554 MGAS10750_SPY0764
SPYO370553 MGAS2096_SPY0744
SPYO370552 MGAS10270_SPY0731
SPYO370551 MGAS9429_SPY0728
SPYO319701 M28_SPY0653
SPYO293653 M5005_SPY0673
SPYO286636 M6_SPY0691
SPYO198466 SPYM3_0587
SPYO193567 SPS1266
SPYO186103 SPYM18_0927
SPYO160490 SPY0866
SPNE488221 SP70585_1597
SPNE487214 SPH_1670
SPNE487213 SPT_1496
SPNE171101 SPR1413
SPNE170187 SPN05345
SPNE1313 SPJ_1462
SMUT210007 SMU_901
SMAR399550 SMAR_1075
SHAE279808 SH1455
SGOR29390 SGO_1117
SERY405948 SACE_7377
SEPI176280 SE_1145
SEPI176279 SERP1027
SAVE227882 SAV4299
SAUR93062 SACOL1497
SAUR93061 SAOUHSC_01474
SAUR426430 NWMN_1368
SAUR418127 SAHV_1445
SAUR367830 SAUSA300_1348
SAUR359787 SAURJH1_1545
SAUR359786 SAURJH9_1516
SAUR282459 SAS1400
SAUR282458 SAR1468
SAUR273036 SAB1321C
SAUR196620 MW1347
SAUR158879 SA1290
SAUR158878 SAV1457
SALA317655 SALA_0724
SAGA211110 GBS1411
SAGA208435 SAG_1341
SAGA205921 SAK_1372
SACI330779 SACI_0380
RXYL266117
RSP357808
RLEG216596 RL2643
RETL347834 RHE_CH02329
RCAS383372
PTOR263820 PTO1123
PTHE370438
PSP117 RB1993
PRUM264731
PPEN278197 PEPE_1072
PMOB403833
PMAR93060 P9215_02861
PMAR74546 PMT9312_0264
PMAR59920 PMN2A_1628
PMAR167555 NATL1_03401
PMAR167546 P9301ORF_0289
PMAR167542 P9515ORF_0307
PMAR167540 PMM0262
PMAR146891 A9601_02841
PLUT319225
PISL384616 PISL_1878
PINT246198
PHOR70601
PGIN242619
PFUR186497 PF1198
PDIS435591
PAST100379 PAM102
PARS340102 PARS_1005
PAER178306 PAE3378
PACN267747 PPA1383
PABY272844
OIHE221109 OB1765
NSP103690 ALR3085
NPHA348780
NARO279238 SARO_3101
MVAN350058 MVAN_5575
MTUB419947
MTUB336982
MTHE349307
MTHE187420 MTH1521
MTBRV
MTBCDC
MSYN262723
MSTA339860 MSP_1057
MSP189918 MKMS_5029
MSP164757 MJLS_5322
MSP164756 MMCS_4941
MSED399549 MSED_1483
MPUL272635
MPNE272634
MPEN272633
MMYC272632
MMOB267748
MMAZ192952
MMAR444158
MMAR426368
MMAR402880
MMAR368407
MMAR267377
MLEP272631 ML2697
MLAB410358
MKAN190192
MJAN243232
MHYO295358
MHYO262722
MHYO262719
MHUN323259
MGEN243273
MFLO265311
MCAP340047
MBUR259564 MBUR_0085
MBOV410289
MBOV233413
MBAR269797
MAVI243243 MAV_5294
MART243272
MAER449447 MAE_19120
MAEO419665
MACE188937
LXYL281090 LXX25190
LWEL386043 LWE1924
LSPH444177 BSPH_1982
LSAK314315 LSA1004
LREU557436 LREU_0767
LPLA220668 LP_1873
LMON265669 LMOF2365_1934
LMON169963 LMO1905
LMES203120 LEUM_0756
LLAC272623 L0324
LLAC272622 LACR_1653
LJOH257314 LJ_1100
LINT267671 LIC_11065
LINT189518 LA3001
LINN272626 LIN2019
LHEL405566 LHV_1066
LGAS324831 LGAS_0908
LDEL390333 LDB1280
LDEL321956 LBUL_1197
LBRE387344 LVIS_0782
LBOR355277 LBJ_1990
LBOR355276 LBL_1060
LBIF456481 LEPBI_I1386
LBIF355278 LBF_1332
LACI272621 LBA0973
KRAD266940 KRAD_4494
IHOS453591 IGNI_0354
HWAL362976 HQ1973A
HSP64091
HSAL478009
HNEP81032 HNE_0503
HMUK485914
HMAR272569
HBUT415426 HBUT_0601
HAUR316274 HAUR_1069
GVIO251221 GLL1734
GTHE420246 GTNG_2115
GOXY290633 GOX0622
GKAU235909 GK2181
GFOR411154
GBET391165 GBCGDNIH1_1387
FTUL458234 FTA_0234
FTUL418136 FTW_1778
FTUL401614 FTN_0221
FTUL393115 FTF0307
FTUL393011 FTH_0213
FTUL351581 FTL_0218
FSP1855 FRANEAN1_7321
FSP106370 FRANCCI3_4531
FRANT GLTX
FPHI484022 FPHI_0603
FNUC190304 FN0243
FNOD381764
FMAG334413 FMG_0414
FJOH376686
FALN326424 FRAAL6862
ERUM302409 ERGA_CDS_00330
EFAE226185 EF_1558
ECHA205920 ECH_0064
ECAN269484 ECAJ_0036
DSP255470
DSP216389
DRED349161 DRED_2531
DRAD243230 DR_1687
DGEO319795 DGEO_1023
DETH243164 DET_1116
CTRA471473 CTLON_0663
CTRA471472 CTL0667
CTEP194439
CSUL444179
CPRO264201 PC1308
CPNE182082 CPB1003
CPNE138677 CPJ0966
CPNE115713 CPN0966
CPNE115711 CP_0894
CPEL335992 SAR11_1135
CNOV386415 NT01CX_0808
CMUR243161 TC_0691
CMIC443906 CMM_2964
CMIC31964 CMS3100
CMET456442
CMAQ397948 CMAQ_0768
CKOR374847
CJEJ195099 CJE_1480
CJEI306537 JK2088
CHYD246194 CHY_2087
CHUT269798
CGLU196627 CG0289
CFET360106 CFF8240_1562
CFEL264202 CF0222
CEFF196164 CE0203
CDIP257309
CDIF272563 CD2466
CDES477974 DAUD_0478
CCHL340177 CAG_0722
CCAV227941 CCA_00791
CBLO291272 BPEN_154
CBLO203907 BFL149
CACE272562 CAC0144
CABO218497 CAB758
BXEN266265
BWEI315730 BCERKBAB4_1462
BTUR314724 BT0706
BTHU412694 BALH_1390
BTHU281309 BT9727_1418
BTHE226186
BSUB BSU22450
BPUM315750 BPUM_1976
BLIC279010 BL02754
BHER314723 BH0706
BGAR290434 BG0728
BFRA295405
BFRA272559
BCLA66692 ABC1497
BCER572264 BCA_1595
BCER405917 BCE_1665
BCER315749 BCER98_1260
BCER288681 BCE33L1419
BCER226900 BC_1536
BBUR224326 BB_0706
BBAC360095 BARBAKC583_0600
BAPH372461 BCC_128
BANT592021 BAA_1626
BANT568206 BAMEG_3036
BANT261594 GBAA1559
BANT260799 BAS1446
BAMY326423 RBAM_020600
BAFZ390236 BAPKO_0749
AYEL322098 AYWB_607
AVAR240292 AVA_4859
AURANTIMONAS
APER272557 APE0454
ANAE240017 ANA_2199
AMET293826 AMET_2465
ALAI441768 ACL_0208
AFUL224325 AF_1516
ACEL351607 ACEL_2139
ABUT367737
ABAC204669 ACID345_0497


Organism features enriched in list (features available for 279 out of the 297 orgs in the list)
Feature    Pvalue       Num occurrences in list  Total num occurrences  
Arrangment:Chains 0.00700025492
Arrangment:Clusters 0.00005481617
Disease:Pharyngitis 0.002608988
Disease:Toxic-shock_syndrome_and_staphylococcal_scarlet_fever 0.00027151111
Disease:Wide_range_of_infections 0.00027151111
Disease:bronchitis_and_pneumonitis 0.002608988
Disease:gastroenteritis 0.0023087113
Endospores:No 2.190e-18151211
GC_Content_Range4:0-40 5.051e-17150213
GC_Content_Range4:40-60 6.415e-682224
GC_Content_Range4:60-100 6.749e-647145
GC_Content_Range7:0-30 0.00903293047
GC_Content_Range7:30-40 3.823e-14120166
GC_Content_Range7:50-60 4.280e-1023107
GC_Content_Range7:60-70 2.903e-739134
Genome_Size_Range5:0-2 3.061e-14114155
Genome_Size_Range5:2-4 0.0058478107197
Genome_Size_Range5:4-6 4.119e-1545184
Genome_Size_Range5:6-10 0.00175401347
Genome_Size_Range9:0-1 0.00004012327
Genome_Size_Range9:1-2 1.213e-991128
Genome_Size_Range9:2-3 0.000025677120
Genome_Size_Range9:4-5 3.579e-72496
Genome_Size_Range9:5-6 3.821e-72188
Genome_Size_Range9:6-8 0.00290451038
Gram_Stain:Gram_Neg 3.659e-3587333
Gram_Stain:Gram_Pos 8.988e-21120150
Habitat:Multiple 0.001706470178
Habitat:Specialized 0.00001314053
Motility:No 1.561e-12109151
Motility:Yes 3.119e-993267
Optimal_temp.:25-30 0.0005184219
Optimal_temp.:30-37 1.290e-61818
Oxygen_Req:Anaerobic 0.000359964102
Shape:Coccus 1.446e-96482
Shape:Irregular_coccus 2.787e-61717
Shape:Rod 4.575e-14122347
Shape:Sphere 0.00089331619
Temp._range:Hyperthermophilic 7.232e-72223
Temp._range:Mesophilic 0.0002080210473
Temp._range:Thermophilic 0.00005012835



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ORGANISMS ENRICHED FOR GROUP:




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ORGANISMS DEPLETED FOR GROUP:




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PHYLOGENETIC PROFILE SIMILARITY WITH KNOWN PATHWAYS:

Pathways or complexes with absolute value of Pearson coefficient with respect to candidate larger than 0.4 are listed below
The candidate is assumed to exist in orgs listed in section List of organisms containing most genes from the group


Pathway or complex  # Orgs containing it  # of those orgs also containing candidate  Pearson Coeff  
PWY-5111 (CMP-KDO biosynthesis II (from D-arabinose 5-phosphate))3002140.6721
GLYCOCAT-PWY (glycogen degradation I)2461870.6415
PWY4FS-7 (phosphatidylglycerol biosynthesis I (plastidic))2912050.6358
COBALSYN-PWY (adenosylcobalamin salvage from cobinamide I)1951620.6344
PWY-1269 (CMP-KDO biosynthesis I)3252170.6299
PWY0-1319 (CDP-diacylglycerol biosynthesis II)2962060.6294
KDO-LIPASYN-PWY (KDO2-lipid A biosynthesis I)2251750.6244
PWY0-1241 (ADP-L-glycero-β-D-manno-heptose biosynthesis)2181710.6193
PHOSLIPSYN-PWY (phospholipid biosynthesis I)2901990.5985
NAGLIPASYN-PWY (lipid IVA biosynthesis)3482200.5960
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY (4-hydroxyphenylacetate degradation)1491310.5830
PWY-5918 (heme biosynthesis I)2721880.5736
PWY-5913 (TCA cycle variation IV)3011980.5634
HEME-BIOSYNTHESIS-II (heme biosynthesis from uroporphyrinogen-III I)2861920.5626
ECASYN-PWY (enterobacterial common antigen biosynthesis)1911470.5410
LIPA-CORESYN-PWY (Lipid A-core biosynthesis)1761390.5366
AST-PWY (arginine degradation II (AST pathway))1201080.5289
GLUTATHIONESYN-PWY (glutathione biosynthesis)3392060.5236
TYRFUMCAT-PWY (tyrosine degradation I)1841410.5223
PWY-4041 (γ-glutamyl cycle)2791820.5146
PWY0-845 (superpathway of pyridoxal 5'-phosphate biosynthesis and salvage)3292000.5074
PWY-5857 (ubiquinone-10 biosynthesis (prokaryotic))1831380.5040
PYRIDOXSYN-PWY (pyridoxal 5'-phosphate biosynthesis I)4222260.4785
GDPRHAMSYN-PWY (GDP-D-rhamnose biosynthesis)1561210.4774
ENTNER-DOUDOROFF-PWY (Entner-Doudoroff pathway I)2491640.4769
GLYCOLYSIS-E-D (superpathway of glycolysis and Entner-Doudoroff)2491640.4769
PWY-5855 (ubiquinone-7 biosynthesis (prokaryotic))1911380.4763
PWY-5669 (phosphatidylethanolamine biosynthesis I)4162230.4697
PWY-5856 (ubiquinone-9 biosynthesis (prokaryotic))2551640.4599
REDCITCYC (TCA cycle variation II)1741270.4554
UBISYN-PWY (ubiquinol-8 biosynthesis (prokaryotic))3982150.4520
PWY-5386 (methylglyoxal degradation I)3051820.4472
GLUCONSUPER-PWY (D-gluconate degradation)2291510.4468
PWY-5028 (histidine degradation II)1301030.4419
KDOSYN-PWY (KDO transfer to lipid IVA I)1801280.4416
PWY0-541 (cyclopropane fatty acid (CFA) biosynthesis)3001790.4399
PWY-5148 (acyl-CoA hydrolysis)2271490.4390
KDO-NAGLIPASYN-PWY (superpathway of KDO2-lipid A biosynthesis)1791270.4378
PWY0-1329 (succinate to cytochrome bo oxidase electron transfer)96820.4218
P344-PWY (acrylonitrile degradation)2101390.4216
PWY-5755 (4-hydroxybenzoate biosynthesis II (bacteria and fungi))81730.4196
PWY0-1335 (NADH to cytochrome bo oxidase electron transfer)112900.4137
PLPSAL-PWY (pyridoxal 5'-phosphate salvage pathway)3742010.4095
LIPASYN-PWY (phospholipases)2121380.4083
PWY0-862 (cis-dodecenoyl biosynthesis)3431900.4076
CHOLINE-BETAINE-ANA-PWY (choline degradation I)1351010.4046
PWY-3162 (tryptophan degradation V (side chain pathway))94790.4046
BETSYN-PWY (glycine betaine biosynthesis I (Gram-negative bacteria))1381020.4004



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PAIRWISE GENOME CONTEXT SCORE MATRIX:

  EG10949   EG10690   EG10230   
EG113620.9993710.9994080.999484
EG109490.9993490.999492
EG106900.999478
EG10230



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PAIRWISE BLAST SCORES:

  EG11362   EG10949   EG10690   EG10230   
EG113620.0f0---
EG10949-0.0f0--
EG10690--0.0f0-
EG10230---0.0f0



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PATHWAYS OR PROTEIN COMPLEX MATCHES IN TARGET ORG:

For each case, all genes involved in the pathway or complex are listed. For each gene we list: a tag indicating whether the gene is part of the candidate list or not, the average and the minimum scores of the gene to the candidate list, the gene name, and its product names.



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GENOME CONTEXT INFORMATION:

Each row corresponds to a replicon in an organism, each column to a gene in the candidate. The second column indicates whether the organims was included in the list used to compute the genome context scores or not. Some organisms are not included because they are phylogenetically too similar to others already in the list.
The number in the matrix indicate the position of the homolog of the gene in the replicon. All numbers are relative to the smaller one, which is assigned a position of zero. Two columns with the same number indicate that the two genes matched the same gene in that organism.

Genome browser links for gene clusters

The links below opens a genome browser BioCyc page for each cluster of genes in the target genome. These pages shows the central gene of the cluster in the target genome and its best homolog in the reference genomes, for the genomes that contain homologs for at least 75% of the genes in the group. Only one genome per phylogenetic cluster of organisms is shown, to keep the list smaller.

EG10230 EG10690 EG10949 EG11362 (centered at EG10230)


ORG:REPLICON:CIRC?\GENE  IN REF LIST  EG11362   EG10949   EG10690   EG10230   
320/623236/623380/623289/623
AAEO224324:0:Tyes-02631446
AAUR290340:2:Tyes0-380-
AAVE397945:0:Tyes2193-11510
ABAC204669:0:Tyes--0-
ABAU360910:0:Tyes3245-5760
ABOR393595:0:Tyes4705
ACAU438753:0:Tyes5412607-0
ACEL351607:0:Tyes--0-
ACRY349163:8:Tyes566--0
ADEH290397:0:Tyes16-02295
AEHR187272:0:Tyes39911592850
AFER243159:0:Tyes8018020303
AFUL224325:0:Tyes-0--
AHYD196024:0:Tyes2031
ALAI441768:0:Tyes--0-
AMAR234826:0:Tyes0--270
AMAR329726:9:Tyes27650--
AMET293826:0:Tyes-0--
ANAE240017:0:Tyes--0-
AORE350688:0:Tyes023061914-
APER272557:0:Tyes-0--
APHA212042:0:Tyes0--923
APLE416269:0:Tyes1103160010
APLE434271:0:Tno1087160610
ASAL382245:5:Tyes1302
ASP1667:3:Tyes0-172-
ASP232721:2:Tyes0-9831656
ASP62928:0:Tyes0-24371395
ASP62977:0:Tyes0-25941
ASP76114:2:Tyes0-17211004
AVAR240292:3:Tyes-0--
AYEL322098:4:Tyes--0-
BABO262698:1:Tno105237-0
BAFZ390236:2:Fyes--0-
BAMB339670:3:Tno1750-02539
BAMB398577:3:Tno1583-02351
BAMY326423:0:Tyes--0-
BANT260799:0:Tno--0-
BANT261594:2:Tno--0-
BANT568206:2:Tyes--0-
BANT592021:2:Tno--0-
BAPH198804:0:Tyes0--126
BAPH372461:0:Tyes--0-
BBAC264462:0:Tyes-024842865
BBAC360095:0:Tyes0---
BBRO257310:0:Tyes4824-39160
BBUR224326:21:Fno--0-
BCAN483179:1:Tno115253-0
BCEN331271:2:Tno1451-02226
BCEN331272:3:Tyes1555-02327
BCER226900:1:Tyes--0-
BCER288681:0:Tno--0-
BCER315749:1:Tyes--0-
BCER405917:1:Tyes--0-
BCER572264:1:Tno--0-
BCIC186490:0:Tyes216-10
BCLA66692:0:Tyes-0--
BGAR290434:2:Fyes--0-
BHAL272558:0:Tyes-0646-
BHEN283166:0:Tyes0179-300
BHER314723:0:Fyes--0-
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ZMOB264203:0:Tyes--720



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