| Num Enr Orgs (#Enr) | >= | 30 |
| Blast P-val (Blast) | >= | 0 |
| Max DoM C2P | >= | 0 |
| Max DoM C2P | <= | 1 |
| Max DoM P2C | >= | 0 |
| Max DoM P2C | <= | 1 |
| Num Genes (#Gen) | >= | 2 |
| Ave Score (Score) | >= | 0.99 |
Names in parenthesis indicate the short name used in the table below.
Interesting candidates are those with a high average score, at least a few enriched organisms and not a very low value of blast pval. A low value of blast pval indicates that most genes are paralogs of others in the group. Too few enriched organisms might mean that the group occured by pure chance.
The candidates are grouped by similarity in the genes they contain. The gene list on the top of each group indicates the genes that are common to all candidates in the group. The genes that are specific to a subset of candidates are listed besided the candidate id.
Groups are sorted by the average number of genes of the candidates included in it, from larger to smaller.
Click on the id of each candidate to see a very detailed report on its genes, their genome context scores, the enriched organisms, etc.
| Candidate ID | Score | #Enr | Blast | #Gen | Gene list (with product names) |
| Group 001 | Genes common to all candidates in group EG11232 (rpmJ, b3299) -> 50S ribosomal subunit protein L36 EG10918 (rpsS, b3316) -> 30S ribosomal subunit protein S19 EG10916 (rpsQ, b3311) -> 30S ribosomal subunit protein S17 EG10912 (rpsM, b3298) -> 30S ribosomal subunit protein S13 EG10910 (rpsK, b3297) -> 30S ribosomal subunit protein S11 EG10909 (rpsJ, b3321) -> 30S ribosomal subunit protein S10 EG10907 (rpsH, b3306) -> 30S ribosomal subunit protein S8 EG10904 (rpsE, b3303) -> 30S ribosomal subunit protein S5 EG10902 (rpsC, b3314) -> 30S ribosomal subunit protein S3 EG10893 (rpoA, b3295) -> RNA polymerase, α subunit EG10888 (rpmD, b3302) -> 50S ribosomal subunit protein L30 EG10884 (rplX, b3309) -> 50S ribosomal subunit protein L24 EG10882 (rplV, b3315) -> 50S ribosomal subunit protein L22 EG10879 (rplR, b3304) -> 50S ribosomal subunit protein L18 EG10878 (rplQ, b3294) -> 50S ribosomal subunit protein L17 EG10877 (rplP, b3313) -> 50S ribosomal subunit protein L16 EG10876 (rplO, b3301) -> 50S ribosomal subunit protein L15 EG10875 (rplN, b3310) -> 50S ribosomal subunit protein L14 EG10869 (rplF, b3305) -> 50S ribosomal subunit protein L6 EG10868 (rplE, b3308) -> 50S ribosomal subunit protein L5 EG10867 (rplD, b3319) -> 50S ribosomal subunit protein L4 EG10866 (rplC, b3320) -> 50S ribosomal subunit protein L3 EG10865 (rplB, b3317) -> 50S ribosomal subunit protein L2 EG10766 (secY, b3300) -> SecY EG10360 (fusA, b3340) -> elongation factor G | |||||
| Candidate 0003 | 1.000 | 240 | 1.000 | 28 | Additional genes in candidate EG10032 (adk, b0474) -> adenylate kinase EG10504 (infA, bypA1) -> protein chain initiation factor IF-1 EG10874 (rplM, b3231) -> 50S ribosomal subunit protein L13 | |
| Candidate 0002 | 1.000 | 247 | 1.000 | 29 | Additional genes in candidate EG10032 (adk, b0474) -> adenylate kinase EG10504 (infA, bypA1) -> protein chain initiation factor IF-1 EG10887 (rpmC, b3312) -> 50S ribosomal subunit protein L29 EG10906 (rpsG, b3341) -> 30S ribosomal subunit protein S7 | |
| Candidate 0001 | 1.000 | 261 | 1.000 | 32 | Additional genes in candidate EG10504 (infA, bypA1) -> protein chain initiation factor IF-1 EG10872 (rplK, b3983) -> 50S ribosomal subunit protein L11 EG10883 (rplW, b3318) -> 50S ribosomal subunit protein L23 EG10887 (rpmC, b3312) -> 50S ribosomal subunit protein L29 EG10903 (rpsD, b3296) -> 30S ribosomal subunit protein S4 EG10906 (rpsG, b3341) -> 30S ribosomal subunit protein S7 EG10911 (rpsL, b3342) -> 30S ribosomal subunit protein S12 | |
| Candidate 0000 | 1.000 | 281 | 0.951 | 41 | Additional genes in candidate EG10667 (nusG, b3982) -> transcription termination factor NusG EG10864 (rplA, b3984) -> 50S ribosomal subunit protein L1 EG10871 (rplJ, b3985) -> 50S ribosomal subunit protein L10 EG10872 (rplK, b3983) -> 50S ribosomal subunit protein L11 EG10873 (rplL, b3986) -> 50S ribosomal subunit protein L7 EG10883 (rplW, b3318) -> 50S ribosomal subunit protein L23 EG10887 (rpmC, b3312) -> 50S ribosomal subunit protein L29 EG10894 (rpoB, b3987) -> RNA polymerase, β subunit EG10895 (rpoC, b3988) -> RNA polymerase, β' subunit EG10903 (rpsD, b3296) -> 30S ribosomal subunit protein S4 EG10906 (rpsG, b3341) -> 30S ribosomal subunit protein S7 EG10911 (rpsL, b3342) -> 30S ribosomal subunit protein S12 EG10913 (rpsN, b3307) -> 30S ribosomal subunit protein S14 EG10939 (secE, b3981) -> SecE EG11036 (tufA, b3339) -> elongation factor Tu EG11037 (tufB, b3980) -> elongation factor Tu |
| Group 002 | Genes common to all candidates in group G7028 (flhB, b1880) -> flagellar biosynthesis protein FlhB G377 (fliI, b1941) -> flagellum-specific ATP synthase FliI G370 (flhA, b1879) -> flagellar biosynthesis protein FlhA G366 (flgJ, b1081) -> FlgJ G365 (flgI, b1080) -> flagellar P-ring protein FlgI G363 (flgG, b1078) -> flagellar basal-body rod protein FlgG EG11977 (fliR, b1950) -> flagellar biosynthesis protein FliR EG11976 (fliQ, b1949) -> flagellar biosynthesis protein FliQ EG11975 (fliP, b1948) -> flagellar biosynthesis protein FliP EG11654 (fliG, b1939) -> flagellar motor switch protein FliG EG11388 (fliS, b1925) -> flagellar biosynthesis protein FliS EG11355 (fliA, b1922) -> RNA polymerase, sigma 28 (sigma F) factor EG11347 (fliF, b1938) -> flagellar M-ring protein FliF; basal-body MS(membrane and supramembrane)-ring and collar protein EG11346 (fliE, b1937) -> flagellar basal-body protein FliE EG10841 (fliD, b1924) -> flagellar cap protein FliD; filament capping protein; enables filament assembly EG10324 (fliN, b1946) -> flagellar motor switch protein FliN EG10323 (fliM, b1945) -> flagellar motor switch protein FliM EG10321 (fliC, b1923) -> flagellar biosynthesis; flagellin, filament structural protein | |||||
| Candidate 0009 | 0.999 | 130 | 1.000 | 24 | Additional genes in candidate EG10322 (fliL, b1944) -> flagellar biosynthesis EG11656 (fliH, b1940) -> flagellar biosynthesis protein FliH EG11967 (flgK, b1082) -> flagellar biosynthesis, hook-filament junction protein 1 G364 (flgH, b1079) -> flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein G378 (fliJ, b1942) -> flagellar biosynthesis protein FliJ G379 (fliK, b1943) -> flagellar hook-length control protein FliK | |
| Candidate 0010 | 0.999 | 118 | 1.000 | 24 | Additional genes in candidate EG10150 (cheY, b1882) -> CheY-acetylated EG10322 (fliL, b1944) -> flagellar biosynthesis EG11656 (fliH, b1940) -> flagellar biosynthesis protein FliH G364 (flgH, b1079) -> flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein G378 (fliJ, b1942) -> flagellar biosynthesis protein FliJ G379 (fliK, b1943) -> flagellar hook-length control protein FliK | |
| Candidate 0011 | 0.999 | 120 | 1.000 | 23 | Additional genes in candidate EG10150 (cheY, b1882) -> CheY-acetylated EG10151 (cheZ, b1881) -> CheZ EG11656 (fliH, b1940) -> flagellar biosynthesis protein FliH G378 (fliJ, b1942) -> flagellar biosynthesis protein FliJ G379 (fliK, b1943) -> flagellar hook-length control protein FliK | |
| Candidate 0008 | 0.999 | 132 | 0.960 | 25 | Additional genes in candidate EG10150 (cheY, b1882) -> CheY-acetylated EG11656 (fliH, b1940) -> flagellar biosynthesis protein FliH G359 (flgC, b1074) -> flagellar basal-body rod protein FlgC G362 (flgF, b1077) -> flagellar basal-body rod protein FlgF G364 (flgH, b1079) -> flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein G378 (fliJ, b1942) -> flagellar biosynthesis protein FliJ G379 (fliK, b1943) -> flagellar hook-length control protein FliK | |
| Candidate 0006 | 0.999 | 144 | 0.962 | 26 | Additional genes in candidate EG11545 (flgL, b1083) -> flagellar biosynthesis; hook-filament junction protein EG11656 (fliH, b1940) -> flagellar biosynthesis protein FliH EG11967 (flgK, b1082) -> flagellar biosynthesis, hook-filament junction protein 1 G359 (flgC, b1074) -> flagellar basal-body rod protein FlgC G362 (flgF, b1077) -> flagellar basal-body rod protein FlgF G364 (flgH, b1079) -> flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein G378 (fliJ, b1942) -> flagellar biosynthesis protein FliJ G379 (fliK, b1943) -> flagellar hook-length control protein FliK | |
| Candidate 0005 | 0.999 | 165 | 0.846 | 26 | Additional genes in candidate EG11545 (flgL, b1083) -> flagellar biosynthesis; hook-filament junction protein EG11967 (flgK, b1082) -> flagellar biosynthesis, hook-filament junction protein 1 G358 (flgB, b1073) -> flagellar basal-body rod protein FlgB G359 (flgC, b1074) -> flagellar basal-body rod protein FlgC G360 (flgD, b1075) -> flagellar biosynthesis, initiation of hook assembly G361 (flgE, b1076) -> flagellar hook protein FlgE G362 (flgF, b1077) -> flagellar basal-body rod protein FlgF G364 (flgH, b1079) -> flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein | |
| Candidate 0004 | 0.999 | 154 | 0.963 | 27 | Additional genes in candidate EG11545 (flgL, b1083) -> flagellar biosynthesis; hook-filament junction protein EG11656 (fliH, b1940) -> flagellar biosynthesis protein FliH EG11967 (flgK, b1082) -> flagellar biosynthesis, hook-filament junction protein 1 G358 (flgB, b1073) -> flagellar basal-body rod protein FlgB G359 (flgC, b1074) -> flagellar basal-body rod protein FlgC G360 (flgD, b1075) -> flagellar biosynthesis, initiation of hook assembly G362 (flgF, b1077) -> flagellar basal-body rod protein FlgF G364 (flgH, b1079) -> flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein G378 (fliJ, b1942) -> flagellar biosynthesis protein FliJ | |
| Candidate 0007 | 0.999 | 145 | 0.962 | 26 | Additional genes in candidate EG10150 (cheY, b1882) -> CheY-acetylated EG11656 (fliH, b1940) -> flagellar biosynthesis protein FliH G358 (flgB, b1073) -> flagellar basal-body rod protein FlgB G359 (flgC, b1074) -> flagellar basal-body rod protein FlgC G360 (flgD, b1075) -> flagellar biosynthesis, initiation of hook assembly G362 (flgF, b1077) -> flagellar basal-body rod protein FlgF G364 (flgH, b1079) -> flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein G378 (fliJ, b1942) -> flagellar biosynthesis protein FliJ |
| Group 003 | Genes common to all candidates in group G7306 (hyfI, b2489) -> hydrogenase 4, small subunit G7305 (hyfH, b2488) -> hydrogenase 4, component H G7304 (hyfG, b2487) -> hydrogenase 4, large subunit G7301 (hyfD, b2484) -> hydrogenase 4, component D EG12093 (nuoN, b2276) -> NADH:ubiquinone oxidoreductase, membrane subunit N EG12092 (nuoL, b2278) -> NADH:ubiquinone oxidoreductase, membrane subunit L EG12091 (nuoK, b2279) -> NADH:ubiquinone oxidoreductase, membrane subunit K EG12090 (nuoJ, b2280) -> NADH:ubiquinone oxidoreductase, membrane subunit J EG12089 (nuoI, b2281) -> NADH:ubiquinone oxidoreductase, chain I EG12088 (nuoH, b2282) -> NADH:ubiquinone oxidoreductase, membrane subunit H EG12087 (nuoG, b2283) -> NADH:ubiquinone oxidoreductase, chain G EG12084 (nuoC, b2286) -> NADH:ubiquinone oxidoreductase, chain CD EG12083 (nuoB, b2287) -> NADH:ubiquinone oxidoreductase, chain B EG12082 (nuoA, b2288) -> NADH:ubiquinone oxidoreductase, membrane subunit A EG11774 (nuoF, b2284) -> NADH:ubiquinone oxidoreductase, chain F EG11773 (nuoM, b2277) -> NADH:ubiquinone oxidoreductase, membrane subunit M EG10480 (hycG, b2719) -> hydrogenase 3 and formate hydrogenlyase complex, HycG subunit EG10479 (hycF, b2720) -> formate hydrogenlyase complex iron-sulfur protein EG10478 (hycE, b2721) -> hydrogenase 3, large subunit EG10477 (hycD, b2722) -> hydrogenase 3, membrane subunit | |||||
| Candidate 0015 | 1.000 | 178 | 0.571 | 21 | Additional genes in candidate EG12086 (nuoE, b2285) -> NADH:ubiquinone oxidoreductase, chain E | |
| Candidate 0014 | 1.000 | 179 | 0.571 | 21 | Additional genes in candidate G7303 (hyfF, b2486) -> hydrogenase 4, component F |
| Group 004 | Candidate 0017 | 1.000 | 199 | 1.000 | 21 | Genes in candidate EG10032 (adk, b0474) -> adenylate kinase EG10504 (infA, bypA1) -> protein chain initiation factor IF-1 EG10867 (rplD, b3319) -> 50S ribosomal subunit protein L4 EG10868 (rplE, b3308) -> 50S ribosomal subunit protein L5 EG10869 (rplF, b3305) -> 50S ribosomal subunit protein L6 EG10874 (rplM, b3231) -> 50S ribosomal subunit protein L13 EG10876 (rplO, b3301) -> 50S ribosomal subunit protein L15 EG10879 (rplR, b3304) -> 50S ribosomal subunit protein L18 EG10882 (rplV, b3315) -> 50S ribosomal subunit protein L22 EG10884 (rplX, b3309) -> 50S ribosomal subunit protein L24 EG10888 (rpmD, b3302) -> 50S ribosomal subunit protein L30 EG10893 (rpoA, b3295) -> RNA polymerase, α subunit EG10902 (rpsC, b3314) -> 30S ribosomal subunit protein S3 EG10904 (rpsE, b3303) -> 30S ribosomal subunit protein S5 EG10907 (rpsH, b3306) -> 30S ribosomal subunit protein S8 EG10908 (rpsI, b3230) -> 30S ribosomal subunit protein S9 EG10909 (rpsJ, b3321) -> 30S ribosomal subunit protein S10 EG10910 (rpsK, b3297) -> 30S ribosomal subunit protein S11 EG10912 (rpsM, b3298) -> 30S ribosomal subunit protein S13 EG10916 (rpsQ, b3311) -> 30S ribosomal subunit protein S17 EG11232 (rpmJ, b3299) -> 50S ribosomal subunit protein L36 |
| Group 005 | Genes common to all candidates in group G7342 (yphF, b2548) -> YphF G7340 (yphD, b2546) -> YphD EG12520 (ytfT, b4230) -> YtfT EG12518 (ytfR, b4228 (obsolete)) -> YtfR EG12517 (ytfQ, b4227) -> YtfQ EG12439 (yjfF, b4231) -> YjfF EG11959 (alsA, b4087) -> AlsA EG11958 (alsC, b4086) -> AlsC EG10817 (rbsD, b3748) -> ribose pyranase EG10816 (rbsC, b3750) -> RbsC EG10815 (rbsB, b3751) -> RbsB EG10814 (rbsA, b3749) -> RbsA EG10059 (araH, b1898 (obsolete)) -> high-affinity L-arabinose transport protein (ABC superfamily, membrane) | |||||
| Candidate 0013 | 0.999 | 79 | 0.091 | 22 | Additional genes in candidate EG10058 (araG, b1900) -> AraG EG10592 (mglA, b2149) -> MglA EG10594 (mglC, b2148) -> MglC EG10818 (rbsK, b3752) -> ribokinase EG12275 (xylG, b3567) -> XylG EG12276 (xylH, b3568) -> XylH EG20252 (xylF, b3566) -> XylF G6800 (lsrA, b1513) -> LsrA G6801 (lsrC, b1514) -> LsrC | |
| Candidate 0012 | 0.999 | 77 | 0.091 | 22 | Additional genes in candidate EG10058 (araG, b1900) -> AraG EG10592 (mglA, b2149) -> MglA EG10594 (mglC, b2148) -> MglC EG10818 (rbsK, b3752) -> ribokinase EG12275 (xylG, b3567) -> XylG EG12276 (xylH, b3568) -> XylH G6800 (lsrA, b1513) -> LsrA G6801 (lsrC, b1514) -> LsrC G7341 (yphE, b2547) -> YphE | |
| Candidate 0016 | 0.999 | 70 | 0.048 | 21 | Additional genes in candidate EG10058 (araG, b1900) -> AraG EG10592 (mglA, b2149) -> MglA EG10594 (mglC, b2148) -> MglC EG12276 (xylH, b3568) -> XylH G6800 (lsrA, b1513) -> LsrA G6801 (lsrC, b1514) -> LsrC G6802 (lsrD, b1515) -> LsrD G7341 (yphE, b2547) -> YphE | |
| Candidate 0018 | 0.999 | 70 | 0.150 | 20 | Additional genes in candidate EG10592 (mglA, b2149) -> MglA EG10594 (mglC, b2148) -> MglC EG10818 (rbsK, b3752) -> ribokinase EG11646 (pscK, b2166) -> predicted pseudouridine kinase EG12275 (xylG, b3567) -> XylG G6800 (lsrA, b1513) -> LsrA G7341 (yphE, b2547) -> YphE | |
| Candidate 0036 | 0.999 | 50 | 0.250 | 16 | Additional genes in candidate EG10818 (rbsK, b3752) -> ribokinase EG20252 (xylF, b3566) -> XylF G6515 (torT, b0994) -> TorT-TMAO | |
| Candidate 0033 | 0.999 | 51 | 0.235 | 17 | Additional genes in candidate EG10818 (rbsK, b3752) -> ribokinase EG11646 (pscK, b2166) -> predicted pseudouridine kinase G6515 (torT, b0994) -> TorT-TMAO G7341 (yphE, b2547) -> YphE |
| Group 006 | Genes common to all candidates in group EG11198 (glmU, b3730) -> GlmU EG11197 (yidC, b3705) -> inner-membrane protein insertion factor EG10997 (mnmE, b3706) -> GTP-binding protein with a role in modification of tRNA EG10862 (rnpA, b3704) -> RNase P protein component; processes tRNA, 4.5S RNA EG10424 (gyrB, b3699) -> DNA gyrase, subunit B EG10376 (rsmG, b3740) -> 16S rRNA m7G527 methyltransferase EG10375 (mnmG, b3741) -> protein involved in a tRNA modification pathway EG10242 (dnaN, b3701) -> DnaN EG10235 (dnaA, b3702) -> chromosomal replication initiator protein DnaA; DNA-binding transcriptional dual regulator EG10105 (atpH, b3735) -> ATP synthase, F1 complex, δ subunit EG10104 (atpG, b3733) -> ATP synthase, F1 complex, γ subunit EG10103 (atpF, b3736) -> ATP synthase, F0 complex, b subunit EG10102 (atpE, b3737) -> ATP synthase, F0 complex, c subunit EG10101 (atpD, b3732) -> ATP synthase, F1 complex, β subunit EG10100 (atpC, b3731) -> ATP synthase, F1 complex, ε subunit EG10099 (atpB, b3738) -> ATP synthase, F0 complex, a subunit EG10098 (atpA, b3734) -> ATP synthase, F1 complex, α subunit | |||||
| Candidate 0025 | 0.999 | 154 | 1.000 | 18 | Additional genes in candidate EG10382 (glmS, b3729) -> GlmS | |
| Candidate 0019 | 0.999 | 152 | 1.000 | 19 | Additional genes in candidate EG10828 (recF, b3700) -> ssDNA and dsDNA binding, ATP binding EG10892 (rpmH, b3703) -> 50S ribosomal subunit protein L34 |
| Group 007 | Genes common to all candidates in group G7665 (lptA, b3200) -> LptA G7664 (lptC, b3199) -> LptC G7663 (kdsC, b3198) -> 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase monomer G7662 (kdsD, b3197) -> D-arabinose 5-phosphate isomerase G7659 (mlaC, b3192) -> MlaC G7657 (yrbA, b3190) -> predicted DNA-binding transcriptional regulator EG12801 (mlaF, b3195) -> MlaF EG12800 (mlaE, b3194) -> MlaE EG12799 (mlaD, b3193) -> MlaD EG12147 (npr, b3206) -> phosphocarrier protein HPr-like NPr, nitrogen related, exchanges phosphate with Enzyme I, Hpr EG12146 (yhbJ, b3205) -> predicted P-loop containing ATPase EG11682 (ptsN, b3204) -> phosphotransferase system enzyme IIA, regulates N metabolism EG11681 (hpf, b3203) -> predicted ribosome-associated, sigma 54 modulation protein EG11680 (lptB, b3201) -> LptB EG11358 (murA, b3189) -> UDP-N-acetylglucosamine enolpyruvoyl transferase EG10898 (rpoN, b3202) -> RNA polymerase, sigma 54 (sigma N) factor | |||||
| Candidate 0027 | 0.999 | 51 | 0.882 | 17 | Additional genes in candidate EG10973 (gutQ, b2708) -> D-arabinose 5-phosphate isomerase | |
| Candidate 0026 | 0.999 | 38 | 1.000 | 17 | Additional genes in candidate EG12802 (yrbG, b3196) -> YrbG CaCA transporter |
| Group 008 | Genes common to all candidates in group EG10139 (cdsA, b0175) -> CDP-diglyceride synthetase EG10335 (frr, b0172) -> ribosome recycling factor EG10455 (hlpA, b0178) -> periplasmic chaperone EG10570 (map, b0168) -> methionine aminopeptidase EG10861 (rnhB, b0183) -> RNAse HII, degrades RNA of DNA-RNA hybrids EG10901 (rpsB, b0169) -> 30S ribosomal subunit protein S2 EG11033 (tsf, b0170) -> protein chain elongation factor EF-Ts EG11411 (glnD, b0167) -> uridylyltransferase / uridylyl-removing enzyme EG11539 (pyrH, b0171) -> PyrH EG12436 (rseP, b0176) -> RseP zinc protease EG12715 (dxr, b0173) -> Dxr G6092 (ispU, b0174) -> subunit of undecaprenyl diphosphate synthase G6093 (bamA, bamA) -> BamA | |||||
| Candidate 0024 | 1.000 | 146 | 1.000 | 18 | Additional genes in candidate EG10238 (dnaE, b0184) -> DNA polymerase III, α subunit EG10316 (lpxD, b0179) -> UDP-3-O-[3-hydroxymyristoyl]glucosamine N-acetyltransferase EG10545 (lpxA, b0181) -> LpxA EG10546 (lpxB, b0182) -> LpxB EG11284 (fabZ, b0180) -> FabZ | |
| Candidate 0023 | 1.000 | 131 | 0.944 | 18 | Additional genes in candidate EG10316 (lpxD, b0179) -> UDP-3-O-[3-hydroxymyristoyl]glucosamine N-acetyltransferase EG10545 (lpxA, b0181) -> LpxA EG10546 (lpxB, b0182) -> LpxB EG11284 (fabZ, b0180) -> FabZ G6728 (ynbB, b1409) -> predicted CDP-diglyceride synthase | |
| Candidate 0047 | 1.000 | 70 | 1.000 | 14 | Additional genes in candidate EG10207 (dapD, b0166) -> tetrahydrodipicolinate succinylase subunit |
| Group 009 | Genes common to all candidates in group EG10146 (cheA, b1888) -> CheA(S) EG10150 (cheY, b1882) -> CheY-acetylated EG10323 (fliM, b1945) -> flagellar motor switch protein FliM EG10324 (fliN, b1946) -> flagellar motor switch protein FliN EG11346 (fliE, b1937) -> flagellar basal-body protein FliE EG11347 (fliF, b1938) -> flagellar M-ring protein FliF; basal-body MS(membrane and supramembrane)-ring and collar protein EG11355 (fliA, b1922) -> RNA polymerase, sigma 28 (sigma F) factor EG11654 (fliG, b1939) -> flagellar motor switch protein FliG EG11975 (fliP, b1948) -> flagellar biosynthesis protein FliP EG11976 (fliQ, b1949) -> flagellar biosynthesis protein FliQ EG11977 (fliR, b1950) -> flagellar biosynthesis protein FliR G370 (flhA, b1879) -> flagellar biosynthesis protein FlhA G377 (fliI, b1941) -> flagellum-specific ATP synthase FliI G7028 (flhB, b1880) -> flagellar biosynthesis protein FlhB | |||||
| Candidate 0035 | 0.999 | 127 | 1.000 | 16 | Additional genes in candidate EG10151 (cheZ, b1881) -> CheZ EG10321 (fliC, b1923) -> flagellar biosynthesis; flagellin, filament structural protein | |
| Candidate 0031 | 0.999 | 148 | 1.000 | 17 | Additional genes in candidate EG10321 (fliC, b1923) -> flagellar biosynthesis; flagellin, filament structural protein G358 (flgB, b1073) -> flagellar basal-body rod protein FlgB G359 (flgC, b1074) -> flagellar basal-body rod protein FlgC | |
| Candidate 0032 | 0.999 | 137 | 1.000 | 17 | Additional genes in candidate EG10147 (cheB, b1883) -> CheB-Pasp EG10149 (cheW, b1887) -> CheW EG10151 (cheZ, b1881) -> CheZ |
| Group 010 | Genes common to all candidates in group EG10265 (lpxC, b0096) -> UDP-3-O-acyl-N-acetylglucosamine deacetylase EG10339 (ftsA, b0094) -> essential cell division protein FtsA EG10347 (ftsZ, b0095) -> essential cell division protein FtsZ EG10604 (mraY, b0087) -> phospho-N-acetylmuramoyl-pentapeptide transferase EG10619 (murC, b0091) -> UDP-N-acetylmuramate-alanine ligase EG10620 (murD, b0088) -> UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase EG10622 (murF, b0086) -> D-alanyl-D-alanine-adding enzyme EG10623 (murG, b0090) -> N-acetylglucosaminyl transferase | |||||
| Candidate 0021 | 1.000 | 117 | 1.000 | 18 | Additional genes in candidate EG10214 (ddlB, b0092) -> ddlB EG10341 (ftsI, b0084) -> essential cell division protein FtsI; penicillin-binding protein 3 EG10342 (ftsQ, b0093) -> essential cell division protein FtsQ EG10344 (ftsW, b0089) -> essential cell division protein FtsW EG10621 (murE, b0085) -> UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase EG10626 (mutT, b0099) -> dGTP pyrophosphohydrolase EG10936 (secA, b0098) -> SecA EG11084 (mraZ, b0081) -> conserved protein EG11085 (rsmH, b0082) -> 16S rRNA m4C1402 methyltransferase EG12313 (yacF, b0102) -> conserved protein | |
| Candidate 0020 | 1.000 | 97 | 1.000 | 18 | Additional genes in candidate EG10214 (ddlB, b0092) -> ddlB EG10342 (ftsQ, b0093) -> essential cell division protein FtsQ EG10344 (ftsW, b0089) -> essential cell division protein FtsW EG10621 (murE, b0085) -> UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase EG10626 (mutT, b0099) -> dGTP pyrophosphohydrolase EG10936 (secA, b0098) -> SecA EG11084 (mraZ, b0081) -> conserved protein EG11085 (rsmH, b0082) -> 16S rRNA m4C1402 methyltransferase EG12313 (yacF, b0102) -> conserved protein EG12314 (yacG, b0101) -> DNA gyrase inhibitor YacG | |
| Candidate 0022 | 1.000 | 110 | 1.000 | 18 | Additional genes in candidate EG10214 (ddlB, b0092) -> ddlB EG10341 (ftsI, b0084) -> essential cell division protein FtsI; penicillin-binding protein 3 EG10342 (ftsQ, b0093) -> essential cell division protein FtsQ EG10344 (ftsW, b0089) -> essential cell division protein FtsW EG10621 (murE, b0085) -> UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase EG10626 (mutT, b0099) -> dGTP pyrophosphohydrolase EG10936 (secA, b0098) -> SecA EG11084 (mraZ, b0081) -> conserved protein EG11085 (rsmH, b0082) -> 16S rRNA m4C1402 methyltransferase EG11086 (ftsL, b0083) -> essential cell division protein FtsL | |
| Candidate 0029 | 0.999 | 90 | 1.000 | 17 | Additional genes in candidate EG10342 (ftsQ, b0093) -> essential cell division protein FtsQ EG10344 (ftsW, b0089) -> essential cell division protein FtsW EG10621 (murE, b0085) -> UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase EG10626 (mutT, b0099) -> dGTP pyrophosphohydrolase EG10936 (secA, b0098) -> SecA EG11084 (mraZ, b0081) -> conserved protein EG12312 (coaE, b0103) -> dephospho-CoA kinase EG12313 (yacF, b0102) -> conserved protein EG12314 (yacG, b0101) -> DNA gyrase inhibitor YacG | |
| Candidate 0030 | 1.000 | 104 | 1.000 | 17 | Additional genes in candidate EG10341 (ftsI, b0084) -> essential cell division protein FtsI; penicillin-binding protein 3 EG10342 (ftsQ, b0093) -> essential cell division protein FtsQ EG10344 (ftsW, b0089) -> essential cell division protein FtsW EG10621 (murE, b0085) -> UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase EG10626 (mutT, b0099) -> dGTP pyrophosphohydrolase EG10936 (secA, b0098) -> SecA EG11084 (mraZ, b0081) -> conserved protein EG12312 (coaE, b0103) -> dephospho-CoA kinase EG12313 (yacF, b0102) -> conserved protein | |
| Candidate 0038 | 1.000 | 136 | 1.000 | 15 | Additional genes in candidate EG10214 (ddlB, b0092) -> ddlB EG10341 (ftsI, b0084) -> essential cell division protein FtsI; penicillin-binding protein 3 EG10344 (ftsW, b0089) -> essential cell division protein FtsW EG10621 (murE, b0085) -> UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase EG11084 (mraZ, b0081) -> conserved protein EG11085 (rsmH, b0082) -> 16S rRNA m4C1402 methyltransferase EG12440 (mpl, b4233) -> UDP-N-acetylmuramate:L-alanyl-γ-D-glutamyl-meso-diaminopimelate ligase | |
| Candidate 0049 | 0.999 | 66 | 1.000 | 14 | Additional genes in candidate EG10041 (ampD, b0110) -> N-acetyl-anhydromuramyl-L-alanine-amidase EG10341 (ftsI, b0084) -> essential cell division protein FtsI; penicillin-binding protein 3 EG10342 (ftsQ, b0093) -> essential cell division protein FtsQ EG10621 (murE, b0085) -> UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase EG12312 (coaE, b0103) -> dephospho-CoA kinase EG12313 (yacF, b0102) -> conserved protein | |
| Candidate 0048 | 0.999 | 51 | 1.000 | 14 | Additional genes in candidate EG10041 (ampD, b0110) -> N-acetyl-anhydromuramyl-L-alanine-amidase EG10342 (ftsQ, b0093) -> essential cell division protein FtsQ EG10621 (murE, b0085) -> UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase EG12312 (coaE, b0103) -> dephospho-CoA kinase EG12313 (yacF, b0102) -> conserved protein EG12314 (yacG, b0101) -> DNA gyrase inhibitor YacG | |
| Candidate 0040 | 1.000 | 80 | 1.000 | 15 | Additional genes in candidate EG10041 (ampD, b0110) -> N-acetyl-anhydromuramyl-L-alanine-amidase EG10214 (ddlB, b0092) -> ddlB EG10341 (ftsI, b0084) -> essential cell division protein FtsI; penicillin-binding protein 3 EG10342 (ftsQ, b0093) -> essential cell division protein FtsQ EG10621 (murE, b0085) -> UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase EG11085 (rsmH, b0082) -> 16S rRNA m4C1402 methyltransferase EG12313 (yacF, b0102) -> conserved protein | |
| Candidate 0039 | 1.000 | 65 | 1.000 | 15 | Additional genes in candidate EG10041 (ampD, b0110) -> N-acetyl-anhydromuramyl-L-alanine-amidase EG10214 (ddlB, b0092) -> ddlB EG10342 (ftsQ, b0093) -> essential cell division protein FtsQ EG10621 (murE, b0085) -> UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase EG11085 (rsmH, b0082) -> 16S rRNA m4C1402 methyltransferase EG12313 (yacF, b0102) -> conserved protein EG12314 (yacG, b0101) -> DNA gyrase inhibitor YacG | |
| Candidate 0076 | 1.000 | 41 | 0.833 | 12 | Additional genes in candidate EG10213 (ddlA, b0381) -> D-alanine-D-alanine ligase A EG10214 (ddlB, b0092) -> ddlB EG10342 (ftsQ, b0093) -> essential cell division protein FtsQ EG10344 (ftsW, b0089) -> essential cell division protein FtsW |
| Group 011 | Genes common to all candidates in group EG50003 (acpP, b1094) -> trans-Δ3-cis-Δ5-dodecenoyl-ACP EG12606 (fabF, b1095) -> FabF EG12302 (tmk, b1098) -> dTMP kinase EG11500 (holB, b1099) -> DNA polymerase III, δ prime subunit EG11494 (yceG, b1097) -> predicted aminodeoxychorismate lyase EG11493 (pabC, b1096) -> pabC EG11437 (plsX, b1090) -> fatty acid/phospholipid synthesis protein EG11318 (fabG, b1093) -> 3-oxo-acyl-[acyl-carrier-protein] reductase EG11317 (fabD, b1092) -> malonyl-CoA-ACP transacylase EG11119 (yceD, b1088) -> conserved protein EG11118 (rluC, b1086) -> 23S rRNA pseudouridine synthase EG10890 (rpmF, b1089) -> 50S ribosomal subunit protein L32 EG10859 (rne, b1084) -> RNase E | |||||
| Candidate 0041 | 0.999 | 61 | 1.000 | 14 | Additional genes in candidate EG12303 (ycfH, b1100) -> predicted metallodependent hydrolase | |
| Candidate 0037 | 0.999 | 69 | 1.000 | 15 | Additional genes in candidate EG10277 (fabH, b1091) -> FabH EG11438 (yceF, b1087) -> predicted protein |
| Group 012 | Genes common to all candidates in group EG10324 (fliN, b1946) -> flagellar motor switch protein FliN EG10601 (motA, b1890) -> MotA protein, proton conductor component of motor; no effect on switching EG11347 (fliF, b1938) -> flagellar M-ring protein FliF; basal-body MS(membrane and supramembrane)-ring and collar protein EG11355 (fliA, b1922) -> RNA polymerase, sigma 28 (sigma F) factor EG11654 (fliG, b1939) -> flagellar motor switch protein FliG EG11975 (fliP, b1948) -> flagellar biosynthesis protein FliP G370 (flhA, b1879) -> flagellar biosynthesis protein FlhA G377 (fliI, b1941) -> flagellum-specific ATP synthase FliI G7028 (flhB, b1880) -> flagellar biosynthesis protein FlhB | |||||
| Candidate 0045 | 0.999 | 94 | 1.000 | 14 | Additional genes in candidate EG10146 (cheA, b1888) -> CheA(S) EG10147 (cheB, b1883) -> CheB-Pasp EG10149 (cheW, b1887) -> CheW EG10150 (cheY, b1882) -> CheY-acetylated EG10151 (cheZ, b1881) -> CheZ | |
| Candidate 0079 | 0.999 | 103 | 1.000 | 12 | Additional genes in candidate EG10146 (cheA, b1888) -> CheA(S) EG10150 (cheY, b1882) -> CheY-acetylated G359 (flgC, b1074) -> flagellar basal-body rod protein FlgC | |
| Candidate 0059 | 0.999 | 79 | 1.000 | 13 | Additional genes in candidate EG10150 (cheY, b1882) -> CheY-acetylated EG10151 (cheZ, b1881) -> CheZ EG10841 (fliD, b1924) -> flagellar cap protein FliD; filament capping protein; enables filament assembly G363 (flgG, b1078) -> flagellar basal-body rod protein FlgG | |
| Candidate 0028 | 0.999 | 140 | 0.765 | 17 | Additional genes in candidate EG10841 (fliD, b1924) -> flagellar cap protein FliD; filament capping protein; enables filament assembly EG11967 (flgK, b1082) -> flagellar biosynthesis, hook-filament junction protein 1 G359 (flgC, b1074) -> flagellar basal-body rod protein FlgC G360 (flgD, b1075) -> flagellar biosynthesis, initiation of hook assembly G361 (flgE, b1076) -> flagellar hook protein FlgE G362 (flgF, b1077) -> flagellar basal-body rod protein FlgF G363 (flgG, b1078) -> flagellar basal-body rod protein FlgG G364 (flgH, b1079) -> flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein | |
| Candidate 0034 | 0.999 | 125 | 0.937 | 16 | Additional genes in candidate EG10150 (cheY, b1882) -> CheY-acetylated EG10841 (fliD, b1924) -> flagellar cap protein FliD; filament capping protein; enables filament assembly G359 (flgC, b1074) -> flagellar basal-body rod protein FlgC G360 (flgD, b1075) -> flagellar biosynthesis, initiation of hook assembly G362 (flgF, b1077) -> flagellar basal-body rod protein FlgF G363 (flgG, b1078) -> flagellar basal-body rod protein FlgG G364 (flgH, b1079) -> flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein |
| Group 013 | Candidate 0044 | 1.000 | 81 | 0.786 | 14 | Genes in candidate EG10360 (fusA, b3340) -> elongation factor G EG10667 (nusG, b3982) -> transcription termination factor NusG EG10865 (rplB, b3317) -> 50S ribosomal subunit protein L2 EG10866 (rplC, b3320) -> 50S ribosomal subunit protein L3 EG10877 (rplP, b3313) -> 50S ribosomal subunit protein L16 EG10883 (rplW, b3318) -> 50S ribosomal subunit protein L23 EG10894 (rpoB, b3987) -> RNA polymerase, β subunit EG10895 (rpoC, b3988) -> RNA polymerase, β' subunit EG10906 (rpsG, b3341) -> 30S ribosomal subunit protein S7 EG10909 (rpsJ, b3321) -> 30S ribosomal subunit protein S10 EG10911 (rpsL, b3342) -> 30S ribosomal subunit protein S12 EG10942 (selB, b3590) -> selenocysteyl-tRNA-specific translation elongation factor EG11036 (tufA, b3339) -> elongation factor Tu EG11037 (tufB, b3980) -> elongation factor Tu |
| Group 014 | Genes common to all candidates in group G7554 (hybO, b2997) -> hydrogenase 2, small subunit EG11805 (hybG, b2990) -> hydrogenase 2 accessory protein EG11804 (hybF, b2991) -> protein involved with the maturation of hydrogenases 1 and 2 EG11802 (hybD, b2993) -> predicted maturation peptidase for hydrogenase 2 EG11801 (hybC, b2994) -> hydrogenase 2, large subunit EG11551 (hypF, b2712) -> hydrogenase maturation protein, carbamoyltransferase EG10487 (hypE, b2730) -> HypE-S-carboxamide EG10486 (hypD, b2729) -> protein involved in maturation of hydrogenase isoenzymes EG10484 (hypB, b2727) -> accessory protein for nickel incorporation into hydrogenase isoenzymes EG10483 (hypA, b2726) -> accessory protein for nickel incorporation into hydrogenase 3 EG10471 (hyaD, b0975) -> protein involved in processing of HyaA and HyaB proteins EG10469 (hyaB, b0973) -> hydrogenase 1, large subunit EG10468 (hyaA, b0972) -> hydrogenase 1, small subunit | |||||
| Candidate 0043 | 0.999 | 98 | 0.429 | 14 | Additional genes in candidate EG10470 (hyaC, b0974) -> hydrogenase 1, b-type cytochrome subunit | |
| Candidate 0042 | 1.000 | 104 | 0.286 | 14 | Additional genes in candidate EG10485 (hypC, b2728) -> protein involved in hydrogenase 3 maturation |
| Group 015 | Genes common to all candidates in group G6780 (ddpB, b1486) -> YddR G6779 (ddpC, b1485) -> YddQ G6432 (gsiD, b0832) -> GsiD G6431 (gsiC, b0831) -> GsiC G2001 (sapB, b1293) -> SapB G2000 (sapC, b1292) -> SapC EG12626 (dppC, b3542) -> DppC EG12625 (dppB, b3543) -> DppB EG12076 (nikB, b3477) -> NikB EG10248 (dppA, b3544) -> DppA | |||||
| Candidate 0056 | 0.999 | 59 | 0.077 | 13 | Additional genes in candidate EG12627 (dppD, b3541) -> DppD G2002 (sapA, b1294) -> SapA G6430 (gsiB, b0830) -> GsiB | |
| Candidate 0055 | 0.999 | 58 | 0.000 | 13 | Additional genes in candidate G2002 (sapA, b1294) -> SapA G6430 (gsiB, b0830) -> GsiB G6781 (ddpA, b1487) -> YddS | |
| Candidate 0057 | 0.999 | 59 | 0.154 | 13 | Additional genes in candidate EG12627 (dppD, b3541) -> DppD EG12628 (dppF, b3540) -> DppF G2002 (sapA, b1294) -> SapA | |
| Candidate 0058 | 0.999 | 62 | 0.000 | 13 | Additional genes in candidate EG12077 (nikC, b3478) -> NikC G6430 (gsiB, b0830) -> GsiB G6781 (ddpA, b1487) -> YddS |
| Group 016 | Candidate 0054 | 0.999 | 50 | 0.769 | 13 | Genes in candidate EG10435 (hflC, b4175) -> regulator of FtsH protease EG10436 (hflK, b4174) -> regulator of FtsH protease EG10437 (hflX, b4173) -> GTPase associated with the 50S subunit of the ribosome EG10438 (hfq, b4172) -> RNA-binding protein that affects many cellular processes; homolog of mammalian Sm/Sm-like proteins EG10595 (miaA, b4171) -> tRNA(i6A37) synthase EG11281 (mutL, b4170) -> MutL EG11363 (amiB, b4169) -> N-acetylmuramoyl-L-alanine amidase 2 EG11757 (yjeE, b4168) -> essential protein with weak ATPase activity EG11758 (yjeF, b4167) -> predicted carbohydrate kinase EG11823 (amiA, b2435) -> N-acetylmuramoyl-L-alanine amidase 1 G7458 (amiC, b2817) -> N-acetylmuramyl-L-alanine amidase G7842 (orn, b4162) -> oligoribonuclease monomer G7843 (yjeS, b4166) -> predicted Fe-S electron transport protein |
| Group 017 | Genes common to all candidates in group G6093 (bamA, bamA) -> BamA EG11647 (accA, b0185) -> acetyl-CoA carboxyltransferase, α subunit EG11411 (glnD, b0167) -> uridylyltransferase / uridylyl-removing enzyme EG11284 (fabZ, b0180) -> FabZ EG10861 (rnhB, b0183) -> RNAse HII, degrades RNA of DNA-RNA hybrids EG10570 (map, b0168) -> methionine aminopeptidase EG10546 (lpxB, b0182) -> LpxB EG10545 (lpxA, b0181) -> LpxA EG10455 (hlpA, b0178) -> periplasmic chaperone EG10316 (lpxD, b0179) -> UDP-3-O-[3-hydroxymyristoyl]glucosamine N-acetyltransferase EG10238 (dnaE, b0184) -> DNA polymerase III, α subunit | |||||
| Candidate 0046 | 0.999 | 92 | 1.000 | 14 | Additional genes in candidate EG10139 (cdsA, b0175) -> CDP-diglyceride synthetase EG10335 (frr, b0172) -> ribosome recycling factor EG12715 (dxr, b0173) -> Dxr | |
| Candidate 0075 | 0.999 | 58 | 1.000 | 12 | Additional genes in candidate G6096 (tilS, b0188) -> tRNAIle-lysidine synthetase |
| Group 018 | Genes common to all candidates in group EG10814 (rbsA, b3749) -> RbsA EG10815 (rbsB, b3751) -> RbsB EG10816 (rbsC, b3750) -> RbsC EG10817 (rbsD, b3748) -> ribose pyranase EG10818 (rbsK, b3752) -> ribokinase EG11646 (pscK, b2166) -> predicted pseudouridine kinase EG11958 (alsC, b4086) -> AlsC EG12028 (yeiI, b2160) -> predicted kinase EG12517 (ytfQ, b4227) -> YtfQ G7340 (yphD, b2546) -> YphD G7342 (yphF, b2548) -> YphF | |||||
| Candidate 0051 | 0.999 | 42 | 0.231 | 13 | Additional genes in candidate EG10592 (mglA, b2149) -> MglA EG12275 (xylG, b3567) -> XylG | |
| Candidate 0050 | 0.999 | 36 | 0.231 | 13 | Additional genes in candidate EG12275 (xylG, b3567) -> XylG G6959 (ydjH, b1772) -> predicted kinase | |
| Candidate 0064 | 0.999 | 30 | 0.333 | 12 | Additional genes in candidate G6515 (torT, b0994) -> TorT-TMAO |
| Group 019 | Genes common to all candidates in group G6754 (ydcV, b1443) -> YdcV G6753 (ydcU, b1442) -> YdcU G6752 (ydcT, b1441) -> YdcT G6751 (ydcS, b1440) -> YdcS EG11632 (potI, b0857) -> PotI EG11631 (potH, b0856) -> PotH EG11630 (potG, b0855) -> PotG EG10752 (potD, b1123) -> PotD EG10751 (potC, b1124) -> PotC EG10750 (potB, b1125) -> PotB EG10749 (potA, b1126) -> PotA | |||||
| Candidate 0067 | 1.000 | 44 | 0.000 | 12 | Additional genes in candidate EG11629 (potF, b0854) -> PotF | |
| Candidate 0066 | 1.000 | 51 | 0.083 | 12 | Additional genes in candidate EG12340 (afuC, b0262) -> CP4-6 prophage; predicted ferric transporter subunit/ATP-binding component of ABC superfamily |
| Group 020 | Candidate 0060 | 1.000 | 45 | 0.667 | 12 | Genes in candidate EG11545 (flgL, b1083) -> flagellar biosynthesis; hook-filament junction protein EG11967 (flgK, b1082) -> flagellar biosynthesis, hook-filament junction protein 1 G357 (flgA, b1072) -> flagellar biosynthesis; assembly of basal-body periplasmic P ring G358 (flgB, b1073) -> flagellar basal-body rod protein FlgB G359 (flgC, b1074) -> flagellar basal-body rod protein FlgC G360 (flgD, b1075) -> flagellar biosynthesis, initiation of hook assembly G361 (flgE, b1076) -> flagellar hook protein FlgE G362 (flgF, b1077) -> flagellar basal-body rod protein FlgF G363 (flgG, b1078) -> flagellar basal-body rod protein FlgG G364 (flgH, b1079) -> flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein G365 (flgI, b1080) -> flagellar P-ring protein FlgI G366 (flgJ, b1081) -> FlgJ |
| Group 021 | Genes common to all candidates in group G7306 (hyfI, b2489) -> hydrogenase 4, small subunit G7304 (hyfG, b2487) -> hydrogenase 4, large subunit G7303 (hyfF, b2486) -> hydrogenase 4, component F EG10480 (hycG, b2719) -> hydrogenase 3 and formate hydrogenlyase complex, HycG subunit EG10478 (hycE, b2721) -> hydrogenase 3, large subunit EG10477 (hycD, b2722) -> hydrogenase 3, membrane subunit EG10476 (hycC, b2723) -> hydrogenase 3, membrane subunit | |||||
| Candidate 0053 | 1.000 | 82 | 0.231 | 13 | Additional genes in candidate EG10479 (hycF, b2720) -> formate hydrogenlyase complex iron-sulfur protein EG11282 (hyfB, b2482) -> hydrogenase 4, component B EG12092 (nuoL, b2278) -> NADH:ubiquinone oxidoreductase, membrane subunit L EG12093 (nuoN, b2276) -> NADH:ubiquinone oxidoreductase, membrane subunit N G7301 (hyfD, b2484) -> hydrogenase 4, component D G7305 (hyfH, b2488) -> hydrogenase 4, component H | |
| Candidate 0052 | 1.000 | 89 | 0.385 | 13 | Additional genes in candidate EG10479 (hycF, b2720) -> formate hydrogenlyase complex iron-sulfur protein EG11773 (nuoM, b2277) -> NADH:ubiquinone oxidoreductase, membrane subunit M EG12092 (nuoL, b2278) -> NADH:ubiquinone oxidoreductase, membrane subunit L EG12093 (nuoN, b2276) -> NADH:ubiquinone oxidoreductase, membrane subunit N G7301 (hyfD, b2484) -> hydrogenase 4, component D G7305 (hyfH, b2488) -> hydrogenase 4, component H | |
| Candidate 0070 | 1.000 | 59 | 0.083 | 12 | Additional genes in candidate EG10479 (hycF, b2720) -> formate hydrogenlyase complex iron-sulfur protein EG11282 (hyfB, b2482) -> hydrogenase 4, component B G7300 (hyfC, b2483) -> hydrogenase 4, component C G7301 (hyfD, b2484) -> hydrogenase 4, component D G7305 (hyfH, b2488) -> hydrogenase 4, component H | |
| Candidate 0121 | 1.000 | 44 | 0.100 | 10 | Additional genes in candidate EG11282 (hyfB, b2482) -> hydrogenase 4, component B G7300 (hyfC, b2483) -> hydrogenase 4, component C G7302 (hyfE, b2485) -> hydrogenase 4, component E |
| Group 022 | Candidate 0062 | 0.999 | 42 | 0.667 | 12 | Genes in candidate EG10983 (suhB, b2533) -> inositol monophosphatase EG11328 (fdx, b2525) -> oxidized ferredoxin EG11378 (sufA, b1684) -> Fe-S cluster assembly, scaffold protein EG12130 (hscA, b2526) -> chaperone, member of Hsp70 protein family EG12131 (hscB, b2527) -> Hsc20 co-chaperone that acts with Hsc66 in IscU iron-sulfur cluster assembly EG12132 (iscA, b2528) -> iron-sulfur cluster assembly protein EG12309 (yjtD, b4403) -> predicted rRNA methyltransferase EG12311 (iscX, b2524) -> protein with possible role in iron-sulfur cluster biogenesis G7324 (iscU, b2529) -> scaffold protein involved in iron-sulfur cluster assembly G7325 (iscS, b2530) -> cysteine desulfurase monomer G7326 (iscR, b2531) -> IscR transcriptional dual regulator G7327 (trmJ, b2532) -> tRNA:Cm32/Um32 methyltransferase |
| Group 023 | Genes common to all candidates in group G7342 (yphF, b2548) -> YphF EG12520 (ytfT, b4230) -> YtfT EG12517 (ytfQ, b4227) -> YtfQ EG12439 (yjfF, b4231) -> YjfF EG12276 (xylH, b3568) -> XylH EG12275 (xylG, b3567) -> XylG EG11959 (alsA, b4087) -> AlsA EG10814 (rbsA, b3749) -> RbsA EG10594 (mglC, b2148) -> MglC EG10593 (mglB, b2150) -> MglB EG10592 (mglA, b2149) -> MglA | |||||
| Candidate 0069 | 0.999 | 37 | 0.417 | 12 | Additional genes in candidate EG20252 (xylF, b3566) -> XylF | |
| Candidate 0068 | 0.999 | 35 | 0.333 | 12 | Additional genes in candidate G7341 (yphE, b2547) -> YphE |
| Group 024 | Candidate 0106 | 1.000 | 46 | 0.818 | 11 | Genes in candidate EG10123 (birA, birA) -> bifunctional biotin-[acetyl-CoA-carboxylase] ligase and transcriptional repressor EG10667 (nusG, b3982) -> transcription termination factor NusG EG10864 (rplA, b3984) -> 50S ribosomal subunit protein L1 EG10871 (rplJ, b3985) -> 50S ribosomal subunit protein L10 EG10872 (rplK, b3983) -> 50S ribosomal subunit protein L11 EG10873 (rplL, b3986) -> 50S ribosomal subunit protein L7 EG10894 (rpoB, b3987) -> RNA polymerase, β subunit EG10895 (rpoC, b3988) -> RNA polymerase, β' subunit EG10939 (secE, b3981) -> SecE EG11036 (tufA, b3339) -> elongation factor Tu EG11037 (tufB, b3980) -> elongation factor Tu |
| Group 025 | Candidate 0086 | 1.000 | 141 | 0.909 | 11 | Genes in candidate EG10480 (hycG, b2719) -> hydrogenase 3 and formate hydrogenlyase complex, HycG subunit EG11774 (nuoF, b2284) -> NADH:ubiquinone oxidoreductase, chain F EG12082 (nuoA, b2288) -> NADH:ubiquinone oxidoreductase, membrane subunit A EG12083 (nuoB, b2287) -> NADH:ubiquinone oxidoreductase, chain B EG12084 (nuoC, b2286) -> NADH:ubiquinone oxidoreductase, chain CD EG12087 (nuoG, b2283) -> NADH:ubiquinone oxidoreductase, chain G EG12088 (nuoH, b2282) -> NADH:ubiquinone oxidoreductase, membrane subunit H EG12089 (nuoI, b2281) -> NADH:ubiquinone oxidoreductase, chain I EG12092 (nuoL, b2278) -> NADH:ubiquinone oxidoreductase, membrane subunit L EG12093 (nuoN, b2276) -> NADH:ubiquinone oxidoreductase, membrane subunit N EG12095 (secG, b3175) -> SecG |
| Group 026 | Genes common to all candidates in group EG12794 (yhbY, b3180) -> predicted RNA-binding protein EG12095 (secG, b3175) -> SecG EG11507 (rlmE, b3179) -> 23S rRNA 2'-O-ribose U2552 methyltransferase EG11179 (rimP, b3170) -> ribosome maturation protein EG11178 (rbfA, b3167) -> 30S ribosome binding factor EG10665 (nusA, b3169) -> transcription termination/antitermination L factor EG10505 (infB, b3168) -> protein chain initiation factor IF-2 | |||||
| Candidate 0089 | 0.999 | 59 | 1.000 | 11 | Additional genes in candidate EG10415 (greA, b3181) -> transcription elongation factor GreA EG11177 (truB, b3166) -> tRNA pseudouridine 55 synthase EG11506 (ftsH, b3178) -> ATP-dependent zinc metalloprotease FtsH EG11553 (glmM, b3176) -> phosphoglucosamine mutase | |
| Candidate 0090 | 0.999 | 55 | 1.000 | 11 | Additional genes in candidate EG10415 (greA, b3181) -> transcription elongation factor GreA EG10914 (rpsO, b3165) -> 30S ribosomal subunit protein S15 EG11177 (truB, b3166) -> tRNA pseudouridine 55 synthase EG11553 (glmM, b3176) -> phosphoglucosamine mutase | |
| Candidate 0088 | 0.999 | 52 | 1.000 | 11 | Additional genes in candidate EG10415 (greA, b3181) -> transcription elongation factor GreA EG11506 (ftsH, b3178) -> ATP-dependent zinc metalloprotease FtsH EG11553 (glmM, b3176) -> phosphoglucosamine mutase EG50011 (folP, b3177) -> FolP | |
| Candidate 0119 | 0.999 | 47 | 1.000 | 10 | Additional genes in candidate EG10743 (pnp, bfl) -> polynucleotide phosphorylase monomer EG10914 (rpsO, b3165) -> 30S ribosomal subunit protein S15 EG11177 (truB, b3166) -> tRNA pseudouridine 55 synthase |
| Group 027 | Genes common to all candidates in group EG10336 (fruA, b2167) -> FruA EG10337 (fruK, b2168) -> 1-phosphofructokinase monomer EG10700 (pfkB, b1723) -> 6-phosphofructokinase-2 monomer EG11863 (frvB, b3899) -> FrvB EG11908 (frwC, b3949) -> FrwC EG13235 (mngA, b0731) -> MngA G7249 (fryC, b2386) -> predicted enzyme IIC component of PTS | |||||
| Candidate 0091 | 1.000 | 48 | 0.091 | 11 | Additional genes in candidate EG11909 (frwB, b3950) -> FrwB EG11912 (frwD, b3953) -> PTS system fructose-like IIB component 2 G7250 (fryB, b2387) -> predicted enzyme IIB component of PTS G7990 (fruB, b2169) -> FruB | |
| Candidate 0071 | 1.000 | 46 | 0.000 | 12 | Additional genes in candidate EG11682 (ptsN, b3204) -> phosphotransferase system enzyme IIA, regulates N metabolism EG11864 (frvA, b3900) -> FrvA EG11909 (frwB, b3950) -> FrwB EG11912 (frwD, b3953) -> PTS system fructose-like IIB component 2 G7250 (fryB, b2387) -> predicted enzyme IIB component of PTS | |
| Candidate 0176 | 0.999 | 43 | 0.000 | 9 | Additional genes in candidate EG10615 (mtlA, b3599) -> MtlA G7990 (fruB, b2169) -> FruB |
| Group 028 | Genes common to all candidates in group EG10248 (dppA, b3544) -> DppA EG12625 (dppB, b3543) -> DppB EG12626 (dppC, b3542) -> DppC EG12627 (dppD, b3541) -> DppD EG12628 (dppF, b3540) -> DppF G2001 (sapB, b1293) -> SapB G2002 (sapA, b1294) -> SapA G6780 (ddpB, b1486) -> YddR | |||||
| Candidate 0097 | 1.000 | 33 | 0.273 | 11 | Additional genes in candidate EG12304 (sapD, b1291) -> SapD EG12305 (sapF, b1290) -> SapF G2000 (sapC, b1292) -> SapC | |
| Candidate 0096 | 0.999 | 35 | 0.273 | 11 | Additional genes in candidate EG12304 (sapD, b1291) -> SapD EG12305 (sapF, b1290) -> SapF G6777 (ddpF, b1483) -> YddO | |
| Candidate 0144 | 0.999 | 35 | 0.200 | 10 | Additional genes in candidate G6777 (ddpF, b1483) -> YddO G6779 (ddpC, b1485) -> YddQ |
| Group 029 | Genes common to all candidates in group G7028 (flhB, b1880) -> flagellar biosynthesis protein FlhB G370 (flhA, b1879) -> flagellar biosynthesis protein FlhA EG11975 (fliP, b1948) -> flagellar biosynthesis protein FliP EG11347 (fliF, b1938) -> flagellar M-ring protein FliF; basal-body MS(membrane and supramembrane)-ring and collar protein EG10602 (motB, b1889) -> MotB protein, enables flagellar motor rotation, linking torque machinery to cell wall EG10601 (motA, b1890) -> MotA protein, proton conductor component of motor; no effect on switching | |||||
| Candidate 0103 | 0.999 | 34 | 1.000 | 11 | Additional genes in candidate EG10146 (cheA, b1888) -> CheA(S) EG10147 (cheB, b1883) -> CheB-Pasp EG10149 (cheW, b1887) -> CheW EG10150 (cheY, b1882) -> CheY-acetylated EG10151 (cheZ, b1881) -> CheZ | |
| Candidate 0186 | 0.999 | 33 | 1.000 | 9 | Additional genes in candidate EG10146 (cheA, b1888) -> CheA(S) EG10150 (cheY, b1882) -> CheY-acetylated G359 (flgC, b1074) -> flagellar basal-body rod protein FlgC | |
| Candidate 0085 | 0.999 | 85 | 0.727 | 11 | Additional genes in candidate EG11967 (flgK, b1082) -> flagellar biosynthesis, hook-filament junction protein 1 G359 (flgC, b1074) -> flagellar basal-body rod protein FlgC G361 (flgE, b1076) -> flagellar hook protein FlgE G363 (flgG, b1078) -> flagellar basal-body rod protein FlgG G364 (flgH, b1079) -> flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein | |
| Candidate 0151 | 0.999 | 53 | 1.000 | 10 | Additional genes in candidate EG10150 (cheY, b1882) -> CheY-acetylated G359 (flgC, b1074) -> flagellar basal-body rod protein FlgC G363 (flgG, b1078) -> flagellar basal-body rod protein FlgG G364 (flgH, b1079) -> flagellar L-ring protein FlgH; basal-body outer-membrane L (lipopolysaccharide layer) ring protein |
| Group 030 | Genes common to all candidates in group G6185 (yahF, b0320) -> predicted acyl-CoA synthetase with NAD(P)-binding domain and succinyl-CoA synthetase domain EG10982 (sucD, b0729) -> succinyl-CoA synthetase, α subunit EG10981 (sucC, b0728) -> succinyl-CoA synthetase, β subunit EG10980 (sucB, b0727) -> SucB EG10979 (sucA, b0726) -> subunit of E1(0) component of 2-oxoglutarate dehydrogenase EG10932 (sdhB, b0724) -> succinate dehydrogenase iron-sulfur protein EG10931 (sdhA, b0723) -> succinate dehydrogenase flavoprotein | |||||
| Candidate 0208 | 1.000 | 37 | 0.750 | 8 | Additional genes in candidate G6287 (fdrA, b0518) -> involved in protein transport; multicopy suppressor of dominant negative ftsH mutants | |
| Candidate 0072 | 1.000 | 74 | 0.583 | 12 | Additional genes in candidate EG10330 (frdA, b4154) -> fumarate reductase flavoprotein EG10331 (frdB, b4153) -> fumarate reductase iron-sulfur protein EG10402 (gltA, b0720) -> citrate synthase monomer EG10933 (sdhC, b0721) -> succinate dehydrogenase membrane protein EG10934 (sdhD, b0722) -> succinate dehydrogenase membrane protein |
| Group 031 | Candidate 0153 | 1.000 | 49 | 0.900 | 10 | Genes in candidate EG10139 (cdsA, b0175) -> CDP-diglyceride synthetase EG10335 (frr, b0172) -> ribosome recycling factor EG10770 (proS, b0194) -> prolyl-tRNA synthetase EG10901 (rpsB, b0169) -> 30S ribosomal subunit protein S2 EG11033 (tsf, b0170) -> protein chain elongation factor EF-Ts EG11539 (pyrH, b0171) -> PyrH EG12436 (rseP, b0176) -> RseP zinc protease EG12715 (dxr, b0173) -> Dxr G6092 (ispU, b0174) -> subunit of undecaprenyl diphosphate synthase G6728 (ynbB, b1409) -> predicted CDP-diglyceride synthase |
| Group 032 | Genes common to all candidates in group RUVB (ruvB, b1860) -> branch migration of Holliday structures; repair helicase RUVA (ruvA, b1861) -> branch migration of Holliday structures; repair EG12854 (ybgF, b0742) -> predicted periplasmic protein EG11110 (ybgC, b0736) -> esterase/thioesterase EG11011 (tolR, b0738) -> TolR EG11010 (tolQ, b0737) -> TolQ EG11008 (tolB, b0740) -> TolB EG10925 (ruvC, b1863) -> Holliday junction nuclease; resolution of structures; repair EG10684 (pal, b0741) -> Pal | |||||
| Candidate 0140 | 1.000 | 45 | 0.900 | 10 | Additional genes in candidate EG10271 (exbB, b3006) -> ExbB protein; uptake of enterochelin; tonB-dependent uptake of B colicins | |
| Candidate 0114 | 1.000 | 43 | 1.000 | 10 | Additional genes in candidate EG11137 (yebC, b1864) -> conserved protein |
| Group 033 | Genes common to all candidates in group EG10146 (cheA, b1888) -> CheA(S) EG10148 (cheR, b1884) -> chemotaxis protein methyltransferase EG10150 (cheY, b1882) -> CheY-acetylated EG10324 (fliN, b1946) -> flagellar motor switch protein FliN EG11355 (fliA, b1922) -> RNA polymerase, sigma 28 (sigma F) factor G370 (flhA, b1879) -> flagellar biosynthesis protein FlhA G7028 (flhB, b1880) -> flagellar biosynthesis protein FlhB | |||||
| Candidate 0188 | 0.999 | 37 | 1.000 | 9 | Additional genes in candidate EG10601 (motA, b1890) -> MotA protein, proton conductor component of motor; no effect on switching G359 (flgC, b1074) -> flagellar basal-body rod protein FlgC | |
| Candidate 0187 | 0.999 | 38 | 1.000 | 9 | Additional genes in candidate G358 (flgB, b1073) -> flagellar basal-body rod protein FlgB G359 (flgC, b1074) -> flagellar basal-body rod protein FlgC | |
| Candidate 0104 | 0.999 | 39 | 1.000 | 11 | Additional genes in candidate EG10147 (cheB, b1883) -> CheB-Pasp EG10149 (cheW, b1887) -> CheW EG10151 (cheZ, b1881) -> CheZ EG10601 (motA, b1890) -> MotA protein, proton conductor component of motor; no effect on switching |
| Group 034 | Candidate 0193 | 1.000 | 53 | 0.000 | 9 | Genes in candidate EG10028 (pflA, b0902) -> pyruvate formate-lyase activating enzyme EG10701 (pflB, b0903) -> PflB EG11784 (yfiD, b2579) -> stress-induced alternate pyruvate formate-lyase subunit EG11910 (pflD, b3951) -> formate acetyltransferase 2 EG11911 (pflC, b3952) -> probable pyruvate formate lyase 2 activating enzyme G6426 (ybiW, b0823) -> predicted pyruvate formate lyase G6427 (ybiY, b0824) -> predicted pyruvate formate lyase activating enzyme G7627 (tdcE, b3114) -> 2-ketobutyrate formate-lyase / pyruvate formate-lyase 4 G7953 (yjjW, b4379) -> predicted pyruvate formate lyase activating enzyme |
| Group 035 | Genes common to all candidates in group EG10494 (ilvB, b3671) -> IlvB EG10499 (ilvH, brnP) -> IlvH EG10500 (ilvI, b0077) -> IlvI EG10502 (ilvN, b3670) -> IlvN EG11226 (leuA, b0074) -> 2-isopropylmalate synthase EG11583 (gcl, b0507) -> Gcl | |||||
| Candidate 0120 | 0.999 | 45 | 0.700 | 10 | Additional genes in candidate EG11575 (leuD, b0071) -> LeuD EG11576 (leuC, b0072) -> LeuC EG11577 (leuB, b0073) -> LeuB G6986 (dmlA, b1800) -> D-malate dehydrogenase (decarboxylating) | |
| Candidate 0217 | 0.999 | 57 | 0.750 | 8 | Additional genes in candidate EG10496 (ilvD, b3771) -> IlvD EG11577 (leuB, b0073) -> LeuB | |
| Candidate 0172 | 1.000 | 74 | 0.667 | 9 | Additional genes in candidate EG10495 (ilvC, b3774) -> IlvC EG10496 (ilvD, b3771) -> IlvD G7236 (oxc, b2373) -> oxalyl-CoA decarboxylase | |
| Candidate 0170 | 1.000 | 58 | 0.667 | 9 | Additional genes in candidate EG10495 (ilvC, b3774) -> IlvC EG10754 (poxB, b0871) -> pyruvate oxidase monomer G7236 (oxc, b2373) -> oxalyl-CoA decarboxylase | |
| Candidate 0218 | 1.000 | 45 | 0.750 | 8 | Additional genes in candidate EG10495 (ilvC, b3774) -> IlvC G6986 (dmlA, b1800) -> D-malate dehydrogenase (decarboxylating) |
| Group 036 | Genes common to all candidates in group G6141 (yagF, b0269) -> CP4-6 prophage; predicted dehydratase EG11583 (gcl, b0507) -> Gcl EG10500 (ilvI, b0077) -> IlvI EG10499 (ilvH, brnP) -> IlvH EG10496 (ilvD, b3771) -> IlvD EG10494 (ilvB, b3671) -> IlvB | |||||
| Candidate 0169 | 0.999 | 77 | 0.667 | 9 | Additional genes in candidate EG11226 (leuA, b0074) -> 2-isopropylmalate synthase EG11577 (leuB, b0073) -> LeuB G7910 (yjhG, b4297) -> KpLE2 phage-like element; predicted dehydratase | |
| Candidate 0168 | 0.999 | 69 | 0.556 | 9 | Additional genes in candidate EG11226 (leuA, b0074) -> 2-isopropylmalate synthase G7236 (oxc, b2373) -> oxalyl-CoA decarboxylase G7910 (yjhG, b4297) -> KpLE2 phage-like element; predicted dehydratase | |
| Candidate 0171 | 0.999 | 70 | 0.778 | 9 | Additional genes in candidate EG10495 (ilvC, b3774) -> IlvC EG11226 (leuA, b0074) -> 2-isopropylmalate synthase G7236 (oxc, b2373) -> oxalyl-CoA decarboxylase | |
| Candidate 0244 | 0.999 | 66 | 0.625 | 8 | Additional genes in candidate EG10257 (edd, b1851) -> phosphogluconate dehydratase G7910 (yjhG, b4297) -> KpLE2 phage-like element; predicted dehydratase |
| Group 037 | Candidate 0220 | 1.000 | 73 | 1.000 | 8 | Genes in candidate EG10444 (hisA, b2024) -> N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase EG10445 (hisB, b2022) -> HisB EG10446 (hisC, b2021) -> HisC EG10447 (hisD, b2020) -> HisD EG10448 (hisF, b2025) -> imidazole glycerol phosphate synthase, HisF subunit EG10449 (hisG, b2019) -> HisG EG10450 (hisH, b2023) -> imidazole glycerol phosphate synthase, HisH subunit EG10451 (hisI, b2026) -> phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase |
| Group 038 | Genes common to all candidates in group EG12412 (rfbB, b2041) -> RmlB EG12411 (rfbD, b2040) -> dTDP-4-dehydrorhamnose reductase EG11979 (rfbC, b2038) -> dTDP-4-dehydrorhamnose 3,5-epimerase EG11978 (rfbA, b2039) -> dTDP-glucose pyrophosphorylase EG11787 (gmd, b2053) -> GDP-mannose 4,6-dehydratase EG11454 (rffH, b3789) -> dTDP-glucose pyrophosphorylase 2 | |||||
| Candidate 0269 | 1.000 | 32 | 0.429 | 7 | Additional genes in candidate EG11453 (rffG, b3788) -> dTDP-glucose 4,6-dehydratase 2 | |
| Candidate 0334 | 0.999 | 31 | 0.714 | 7 | Additional genes in candidate EG10161 (cpsB, b2049) -> mannose-1-phosphate guanylyltransferase |
| Group 039 | Candidate 0346 | 0.999 | 31 | 0.714 | 7 | Genes in candidate EG10063 (argA, b2818) -> ArgA EG10064 (argB, b3959) -> acetylglutamate kinase monomer EG10065 (argC, b3958) -> N-acetylglutamylphosphate reductase EG10066 (argD, b3359) -> ArgD EG10068 (argG, b3172) -> ArgG G6944 (astC, b1748) -> AstC G7596 (ygjG, b3073) -> putrescine aminotransferase / diamine transaminase |
| Group 040 | Candidate 0317 | 0.999 | 31 | 0.714 | 7 | Genes in candidate EG10377 (glgA, b3429) -> glycogen synthase EG10378 (glgB, b3432) -> 1,4-α-glucan branching enzyme EG10379 (glgC, b3430) -> GlgC EG10380 (glgP, b3428) -> GlgP EG10381 (glgX, b3431) -> glycogen phosphorylase-limit dextrin α-1,6-glucohydrolase EG10560 (malP, blu) -> maltodextrin phosphorylase monomer EG10561 (malQ, b3416) -> amylomaltase |